Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00484 ATGGGCAGCGTCACGTACGGCTACAAAATGTTCAAGTACTTCAACAGAACCTTCAACGTCTCCGAGCAGGCCCCTCCGCAGGACGTTAAAGACGCATTCTCCCTCTTCGCTGACGGCGCCGACTCCATGTCCGCCGAACAGCTCCTACGCTTCCTGCATGACCACCAACTCGAATTGGACTACACCGAAGAGGATTCCAACCGCATCGTTGACACCGTTCTGCAATCGCGCAAACAAGACGCCGAATGCGAATCCGAATCCGAATCCGATGTCAGCGGTCTCACCCTCGACGAGTTTTTCCGCTTCTTGTTCCTCGTCGAGTTCAACGATCCCCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCAGATTATTTCATATATACAGGGCACAATTCCTATCTGACCGGGAATCAGCTGAGCAGCGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGGGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAGAGATGATATCGACGTAGTTCATGGAAGGACGCTTACTGCTCCTGTCTCACTTATCCAATGCTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCAGAGTACCCACTCATCTTAACTTTAGAAGACCACCTTACACCATCTCTTCAAGCTAAAGCTGCAGAGATGATTGCTCAAGTATTTGGAGATTTGCTGTACTATCCTGAGACTGATCTTCTCACAGAATTTCCCACACCAGAATCAGTGAAAGGCCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTCAAAGATAGTGACAGTGAGAGGGAATCAATTGATGAAGGATTATCGCCATGCATTATCACTGAATTGGAAGTTGTTGATGAAAAGTCCAATGGAACTGATCTTGATGAGGAAGGCTTGAATTCCCGGGATAAGAAACCAGAACAGAGTGCACCGGAGTACAAACGTTTGATTACAATCCATGCTGGGAAGCCAAAGGGTAATGTAAAGGACCACTTAAACGTTGTTGGGGGTGTAAAGCGCCTGAGCCTGAGCGAACAAGAACTTGAAAAAGCTTCTGCCATTTATGGATCTGATATTGTTAGATTTACGCAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTACCTCCTCAAATTACAGACCACATATAGGATGGATTTACGGAGCTCAGATGGTGGCATTTAATATGCAGGGGCATGGAAAATCACTCTGGTTTATGCAAGGGATGTTTAGAGCGAATGGCGGGTGTGGTTATGTGAAAAAGCCTTCATTTCTGATAGAACAAGGCCCAGATGATGAGGTTTTTGATCCTAAAAAACCAATGCCAGTGAAGAAGACTTTGACGGTAAAAGTATATATGGGAAACGGGTGGAGCTTAGATTTCAGTAAAACACACTTCGATACATTCTCTCCACCGGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCCGCAGATCAAGTCAATAAGAAGACCAGGATAATTCAGGATGATTGGTTTCCCGTTTGGGATGAAGAATTTGAATTTCCTTTGTGTGTTCCAGAACTAGCTCTGCTCTGGATAGAGGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGCGGGCAAGCATGTTTACCAGTCTCTGAGCTAAGATCTGGTTTCCGGGTAGTTCCTCTATTTGATCAGAAGGGCGATCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTCAATGAACAACAAGATTAG 1785 0.4392 MGSVTYGYKMFKYFNRTFNVSEQAPPQDVKDAFSLFADGADSMSAEQLLRFLHDHQLELDYTEEDSNRIVDTVLQSRKQDAECESESESDVSGLTLDEFFRFLFLVEFNDPLKSQVHHDMNAPLSDYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTRDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSEYPLILTLEDHLTPSLQAKAAEMIAQVFGDLLYYPETDLLTEFPTPESVKGRILISTKPPKEYLESKQFKDSDSERESIDEGLSPCIITELEVVDEKSNGTDLDEEGLNSRDKKPEQSAPEYKRLITIHAGKPKGNVKDHLNVVGGVKRLSLSEQELEKASAIYGSDIVRFTQKNIIRVYPKGTRVTSSNYRPHIGWIYGAQMVAFNMQGHGKSLWFMQGMFRANGGCGYVKKPSFLIEQGPDDEVFDPKKPMPVKKTLTVKVYMGNGWSLDFSKTHFDTFSPPDFYTKVCIVGVPADQVNKKTRIIQDDWFPVWDEEFEFPLCVPELALLWIEVREYDKHEKDDFGGQACLPVSELRSGFRVVPLFDQKGDQLKSVKLLMRFQFNEQQD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00484 594 Gene3D Phosphatidylinositol (PI) phosphodiesterase 115 454 IPR017946 GO:0006629|GO:0008081
Spst8g00484 594 Pfam Phosphatidylinositol-specific phospholipase C, X domain 120 262 IPR000909 -
Spst8g00484 594 Pfam C2 domain 462 564 IPR000008 -
Spst8g00484 594 SUPERFAMILY PLC-like phosphodiesterases 118 443 IPR017946 GO:0006629|GO:0008081
Spst8g00484 594 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 589 IPR001192 GO:0035556
Spst8g00484 594 Gene3D - 24 111 - -
Spst8g00484 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 355 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00484 594 SUPERFAMILY EF-hand 11 120 IPR011992 -
Spst8g00484 594 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 462 589 IPR035892 -
Spst8g00484 594 Gene3D C2 domain 456 594 IPR035892 -
Spst8g00484 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 118 262 - -
Spst8g00484 594 SMART plcx_3 118 262 IPR000909 -
Spst8g00484 594 CDD C2_PLC_like 460 589 - -
Spst8g00484 594 PRINTS Phospholipase C signature 556 566 IPR001192 GO:0035556
Spst8g00484 594 PRINTS Phospholipase C signature 380 401 IPR001192 GO:0035556
Spst8g00484 594 PRINTS Phospholipase C signature 401 419 IPR001192 GO:0035556
Spst8g00484 594 PRINTS Phospholipase C signature 246 263 IPR001192 GO:0035556
Spst8g00484 594 PRINTS Phospholipase C signature 123 141 IPR001192 GO:0035556
Spst8g00484 594 PRINTS Phospholipase C signature 149 169 IPR001192 GO:0035556
Spst8g00484 594 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00484 594 SMART C2_3c 462 570 IPR000008 -
Spst8g00484 594 SMART plcy_3 326 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00484 594 ProSiteProfiles C2 domain profile. 443 572 IPR000008 -
Spst8g00484 594 MobiDBLite consensus disorder prediction 301 324 - -
Spst8g00484 594 FunFam Phosphoinositide phospholipase C 457 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00484 Spst-Chr8 4544333 4549218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00484 3 589 Acyl Lipid Metabolism Gene Families AT2G40116 59.772 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00484 K05857 - gmx:100777010 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00484 8 4544333 4549218 Spst8g00484 8 4544333 4549218 ECH
Spst8g00484 8 4544333 4549218 Spst8g00484 8 4544333 4549218 PCT