Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00482 ATGGTAACCCACAACAAATACAAAAGTTTCTTGTTCTTTATCAGAAAGTTCAAGGTTATCGAGCCAGTTCCACCTCAGGACCTTGTGGAGGCGTTTTCAAAGTTCACTGGAGGAGGGTCCCACATGTCCGTGGAGCAGCTCCACCGTTTCATGGTGGAACACCAGGGTGAAGAGAACTACACCTTATCGGATTCGGAAAAAGTTGTTGAGAAGGTTTTGCAAGAGAGAAAGACATATCAGGAAACTGTTAAGGTTGATCAAAACAGAGAACATGAGATCACCCTTGATGAGCTCTTCCGATTTTTGCTTCATAATGATATTAATGGTCCCTTGAAAGCTGAGGTACATCATGATATGGGTGCTCCATTGTCACATTACTTCATATATACAGGCCATAACTCCTATTTGACAGGAAATCAGCTCAGCAGTGACTGCAGTGAAGAGCCAATCATAAAGGCTTTGAAACGAGGCGTGCGAGTTATTGAACTTGACTTATGGCCAACTTGCAATAAGGATGAGATTAAAGTAGATCATGGATGGACTCTTACGAACCCTGTCTCAGTTGTGAAATGTCTAGAGTGCATAAAGGAATATGGTTTTGTTGCATCTCAGTACCCAGTGATCATAACCATAGAAGACCATCTTACAACAGATCTTCGAGCTAAATTTGCAGAAATGGTGACTAAAATATTTGGGGAAGTGCTTTATTACCCTGGGGAAGAATGCTTGACCGAATTCCCTTCACCAGAATCACTGAAAAATCGAGTTATTATATCCACCAAACCCCCAAGAGAACGTTTTAAGTCCAACCGAATTGAGGACAATGAGAACTGTCCTATGCTGAATGAAAGTGAATCGTCTGAAGATGAATCATGGGGAAATGTATCTCCAAACTCCAGTAGGAACGAAGTGGAGACTGAGGACACCAATGGCAGTGATCGTGATGAGGGAAGCACAAGTGCTAGTGAATATGACCACAAACCATATGTGGAGTGTTCACCTGGTTACAAAAGCATAATTACTATCCATAATAGGAAACTGAAGGGTAGCCTGAAGGATAAATTGAAAACTGAAGGTGAAGTTAGACGCCTAAGTTGGAGCGAGAGTACCCTTGAAAAGGCTTCAGAATCTCATGGAACAGATATTCTTAGGTTCACACAGAAAAATATCCTCAGGGTTTACCCTAGTGCAATGCGTGTCAAATCCACAAATTTCAAGCCACATATTGGGTGGATGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGGCATGGTAAATCCCTCTGGTTAATGCAGGGAATGTTCAGGGCAAATGGAGGATGTGGTTATGTAAAGAAGCCTCGAATTCTAATGCAGAAGCATCAATGTGAGAATGAGTTTGATCCTACAAGGATACAGTCATTGAAAAAGACATTAAAGGTAAAAGTATACATGGGACATGGGTGGAGCTCAGATTTCAGTCCTACACACTTTGATAAGTGCTCTCCACCAGACTTCTTTACTAAGATCCGTATAGTTGGAGTGCCCGGTGATGTTGCAAAGAAGAAAACAAAGGTCATCATGGACAACTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCTCTTTAAGTGTTCCAGAGCTTGCATTGCTTCTGATACAAGTAAAGGACAAAGATCAGGGAAAGGATGACTTTGCTGGACAAACATGTTTACCGGTGTCAGAGTTAAAATATGGATTTCGTTCAGTTGCTTTATACAACAGAAAGGGCGACAAATTTAAATCTGTGAAGTTGTTGATGCGGTTTCAGTTTGAATGA 1800 0.4139 MVTHNKYKSFLFFIRKFKVIEPVPPQDLVEAFSKFTGGGSHMSVEQLHRFMVEHQGEENYTLSDSEKVVEKVLQERKTYQETVKVDQNREHEITLDELFRFLLHNDINGPLKAEVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALKRGVRVIELDLWPTCNKDEIKVDHGWTLTNPVSVVKCLECIKEYGFVASQYPVIITIEDHLTTDLRAKFAEMVTKIFGEVLYYPGEECLTEFPSPESLKNRVIISTKPPRERFKSNRIEDNENCPMLNESESSEDESWGNVSPNSSRNEVETEDTNGSDRDEGSTSASEYDHKPYVECSPGYKSIITIHNRKLKGSLKDKLKTEGEVRRLSWSESTLEKASESHGTDILRFTQKNILRVYPSAMRVKSTNFKPHIGWMYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYVKKPRILMQKHQCENEFDPTRIQSLKKTLKVKVYMGHGWSSDFSPTHFDKCSPPDFFTKIRIVGVPGDVAKKKTKVIMDNWFPVWDEEFEFSLSVPELALLLIQVKDKDQGKDDFAGQTCLPVSELKYGFRSVALYNRKGDKFKSVKLLMRFQFE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00482 599 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 361 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00482 599 ProSiteProfiles C2 domain profile. 453 581 IPR000008 -
Spst8g00482 599 Pfam C2 domain 472 572 IPR000008 -
Spst8g00482 599 Gene3D - 23 109 - -
Spst8g00482 599 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
Spst8g00482 599 SMART plcx_3 117 261 IPR000909 -
Spst8g00482 599 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 9 598 IPR001192 GO:0035556
Spst8g00482 599 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 472 598 IPR035892 -
Spst8g00482 599 MobiDBLite consensus disorder prediction 275 305 - -
Spst8g00482 599 SUPERFAMILY PLC-like phosphodiesterases 117 453 IPR017946 GO:0006629|GO:0008081
Spst8g00482 599 PRINTS Phospholipase C signature 148 168 IPR001192 GO:0035556
Spst8g00482 599 PRINTS Phospholipase C signature 245 262 IPR001192 GO:0035556
Spst8g00482 599 PRINTS Phospholipase C signature 565 575 IPR001192 GO:0035556
Spst8g00482 599 PRINTS Phospholipase C signature 122 140 IPR001192 GO:0035556
Spst8g00482 599 PRINTS Phospholipase C signature 411 429 IPR001192 GO:0035556
Spst8g00482 599 PRINTS Phospholipase C signature 390 411 IPR001192 GO:0035556
Spst8g00482 599 Gene3D Phosphatidylinositol (PI) phosphodiesterase 114 464 IPR017946 GO:0006629|GO:0008081
Spst8g00482 599 CDD C2_PLC_like 470 599 - -
Spst8g00482 599 MobiDBLite consensus disorder prediction 306 322 - -
Spst8g00482 599 Pfam Phosphatidylinositol-specific phospholipase C, X domain 119 261 IPR000909 -
Spst8g00482 599 FunFam Phosphoinositide phospholipase C 467 599 - -
Spst8g00482 599 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 365 451 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00482 599 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 117 261 - -
Spst8g00482 599 Gene3D C2 domain 467 599 IPR035892 -
Spst8g00482 599 SMART C2_3c 472 579 IPR000008 -
Spst8g00482 599 MobiDBLite consensus disorder prediction 268 327 - -
Spst8g00482 599 SMART plcy_3 336 452 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Spst8g00482 599 SUPERFAMILY EF-hand 7 119 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00482 Spst-Chr8 4535611 4539392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00482 7 599 Acyl Lipid Metabolism Gene Families AT2G40116 53.257 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00482 K05857 - gmx:100820253 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00482 8 4535611 4539392 Spst8g00482 8 4535611 4539392 ECH
Spst8g00482 8 4535611 4539392 Spst8g00482 8 4535611 4539392 PCT