Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00442 ATGAAGGGTTCGAGCCGTTTCCTCACCATCGGCCTCGTCTCCGCCTGGTACTTCTCCAACATTGGGGTTTTACTCCTCAACAAGTACCTTCTCAGCAACTATGGCTTCAAGTATCCCATATTCCTCACCATGTGTCACATGACCGCTTGCTCCCTCTTCAGCTACGTTGCCATCGCCTGGTTCAAGGTCGTTCCCATGCAGACCATTCGCTCCCGCCTCCAGTTCCTCAAGATCGCCGCCCTTAGCCTCGTCTTCTGTGTCTCCGTCGTCTTCGGCAACGTCTCCCTCCGCTACCTCCCCGTCTCCTTCAACCAGGCTGTCGGCGCCACCACGCCCTTCTTCACCGCCGTCTTCGCCTACCTCATCACCTTCAAGAGAGAGGCCTGGCTCACTTACCTCACCCTCGTCCCCGTTGTCGCCGGCGTCGTCATTGCCAGCGGGGGTGAACCGAGCTTCCATTTATTTGGGTTTATAGTATGTGTTGCAGCTACAGCTGCACGAGCCTTAAAATCCGTGTTGCAAGGAATTTTACTTTCTTCTGAAGGAGAGAAGCTGAATTCCATGAACCTCCTTCTTTACATGGCACCAATTGCTGTTGTTTTCCTTCTCCCTGCTACACTAATAATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCCTTTGGTACCTGCTATTTAATTCAGCACTTGCTTATTTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTTGTAGTTTCAATTATGATATTTAGAAATCCAGTGTCAGTCACTGGAATGATGGGTTATTCATTCACAGTCCTTGGAGTTGTACTTTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 921 0.4929 MKGSSRFLTIGLVSAWYFSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWFKVVPMQTIRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAVGATTPFFTAVFAYLITFKREAWLTYLTLVPVVAGVVIASGGEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDVKILWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSIMIFRNPVSVTGMMGYSFTVLGVVLYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00442 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 148 - -
Spst8g00442 306 PANTHER SOLUTE CARRIER FAMILY 35 10 303 - -
Spst8g00442 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00442 Spst-Chr8 4211456 4214293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00442 1 306 Organic Solute Cotransporters AT3G11320 89.869 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00442 - - gmx:100806704 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00442 8 4211456 4214293 Spst8g00442 8 4211456 4214293 ECH
Spst8g00442 8 4211456 4214293 Spst8g00442 8 4211456 4214293 PCT