Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00407 ATGGAGGAGTCTTCTTACACCGGTCTTCCCACTAGCCACTTGCTCGGTTCAGTTCCTGCTGTCATTACCGAAGAAAATAATACCAATAAACATGTGGCCACTGATGCGAGTATGCAAGTATTCCCTCCCAACAACGGAGGAGGCAGAGGACCCGGTTACCAAACTCTTGGCAGTCCTGCTGAAGTTTTTGAACAACAGCCAGCAAACAATTGGAGGGGAGTCTTTAGCATCTCATCTTATTCACAGTATTTCAATGTGGACACGGATGTTGTCTTAATCAGATTGATAAGTTCCTTGAATCCAGTTGCTGGAGACTTTTTCAGCAAGATAGATGCTAACCCTGATTTATATGGGCTTATATGGATCTCAACAACATTGGTATTTGTGCTTGCCTCACTTGGAAATCTGGCCACGTACCTTATGCAAAAACATGCTGATAACAGTAGCTCTTGGACCTTTGATGTCAGCTATATGAACGTGGCTGCTTGCTCCATCTATGGCTATGCAATTGTGGTCCCTTTGGCATACTATTTCTTCCTTCAGTATATGGGTTCAAATGCAAGCCTTATTAGATTTTGGTGTATGTGGGGGTATTCTCTCACCATTTTCATCATCTCTTCGTTCCTGTTGATAATTCCTGTTGAGTTTCTTCGGTGGGTTATAATACTCCTTACGGGCGTTGCCTCGGCAAGCTTTGTTGCTTTAAACCTGAGGTCTTATATGGAAGGCAATGAGCTGTCAGTGGCGATTATTGCAGCATTTTCATTGCAAATAGCTTTGGCAATCTTCATCAAGGTTTGGTTCTTTCCCTAG 813 0.4317 MEESSYTGLPTSHLLGSVPAVITEENNTNKHVATDASMQVFPPNNGGGRGPGYQTLGSPAEVFEQQPANNWRGVFSISSYSQYFNVDTDVVLIRLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLASLGNLATYLMQKHADNSSSWTFDVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIISSFLLIIPVEFLRWVIILLTGVASASFVALNLRSYMEGNELSVAIIAAFSLQIALAIFIKVWFFP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00407 270 PANTHER UNCHARACTERIZED 32 269 IPR039765 GO:0005794|GO:0016192|GO:0031267
Spst8g00407 270 Pfam Yip1 domain 100 264 IPR006977 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00407 Spst-Chr8 3921253 3924458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00407 K22940 - gmx:100813483 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00407 8 3921253 3924458 Spst8g00407 8 3921253 3924458 ECH
Spst8g00407 8 3921253 3924458 Spst8g00407 8 3921253 3924458 PCT