Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00406 ATGGAGGGCGCGGTGGATCCTTCTCGAAGCTTCATGAAGAACGTGAAGCGCGTGATCATCAAGGTTGGCACCGCGGTTGTCACTCGCAATGATGGAAGGTTAGCGGTTGGAAGATTAGGAGCTCTGTGCGAGCAGATTAAGCAACTCAACTCTCTCAGATACGACATTATCCTCGTCTCCTCCGGCGCCGTCGGTATTGGCCGCCAAAGGCTCCGTTTCCGCAAATTACTCAACAGCAGCTTCAGCGACCTTCAGAAACCCGAACACGAACTCGACGGCAAGGCCTGCGCCGCCGTTGGACAAAACAGTCTCATGGCTCTCTACGATACTCTGTTCACTCAGCTCGACGTTACATCGGCTCAGCTTCTTGTGACGGATAACGATTTTCGAGATGAGGATTTCAGGAAACAACTTACTGAGACTGTGAAATCATTGTTGGCGCTGAAGGTTATTCCGGTGTTCAATGAGAACGATGCTGTCAGTACTAGGAAGGCTCCATATGAGGATTCCTCTGGTATATTTTGGGATAATGATAGTTTATCTGCTTTATTAGCCTTGGAGTTGAAAGCGGATCTCCTTGTTTTGTTGAGTGATGTAGAAGGTCTTTATAGTGGCCCTCCAACTGACCCACAGTCAAAGCTTATTCATACATATAATAAGGAAAGGCATCAGAGTGAAATTACTTTTGGCGACAAGTCTAGAGTGGGAAGAGGTGGAATGACTGCCAAAGTAAAAGCTGCAGTTAATGCAGCAGAAGCTGGCATTCCTGTTGTTATTACCAGTGGTTTTGCGGCTGAGAATATTATTAATGTTCTCCAAGGACAATGTATAGGAACTCTCTTCCATAAAGATGCACATGAGTGGGCCCAAGTAAAAGAGGTTGATGCACGAGAGATGGCAATTGCTGCCAGGGAATGTTCCAGAAGGCTCCAAGCCTTATCTTCAGATGAAAGGAAACAAATTTTATATAAAATAGCTGATGCCCTGGAAGCAAATGAAAAAATAATCACGACTGAAAATGAAGCTGATGTTACCACTGCACAAGAAGCAGGATATGAAAAATCTTTGGTGGATAGGCTAGCTTTAAAACCTGGGAAGATTGCAAGTCTTGCAAACAACATGCGCATTATTGCCAATATGGAAGATCCAATATGTCGAGTATTAAAACGAACTGAGCTTGCAGATGGGTTAATTTTAGAAAAGACATCATCGCCTTTAGGAGTGCTTCTTATTGTTTTTGAGTCACGCCCTGATGCTCTTGTACAGATAGCTTCACTGGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAAGGTGGAAAAGAAGCTAAGCGGTCAAATGCAATTTTGCACAAAGTAATTACTGAGGCCATACCAGACACTGTTGGTGGAAAACTTATAGGGCTTGTGACCTCAAGGGAAGAAATCCCGGAGCTACTGAAGCTGGATGACGTAATTGATCTGGTCATTCCAAGAGGTAGCAACAAACTTGTTTCTCAGATCAAGAGTTCAACTAAAATTCCTGTTTTAGGTCATGCTGATGGAATTTGCCATGTCTATGTTGATAAGTCTGCTAATCTGGAGATGGCAAGACGGATTGTACTGGACGCAAAAATAGATTATCCAGCAGCCTGCAATGCCATGGAAACACTTCTTATCCACAGGGATTTGATAGAGAAAAGTTGGCTCAATGATATCGTACTTGACCTACAAACTGAAGGCGTTATATTATTTGGAGGACCAATAGCAAGTTCTCTGTTGAATGTTCCACAAGCACATTCATTTCATCACGAGTACAGTTCGCTGGCTTGCACTGTTGAAATTGTGGATGACGTGTATGCAGCAATTGATCACATAAATCTTTATGGAAGGCACGTCGTTGTTTTCTGCTTGATAGGAAATATTGCACATACTGATTCCATCATTGCTGAAGATAACGAAGTGGCTAGTGTGTTTCTACGCCAAGTAGACAGTGCTGCTGTTTTTCACAATGCAAGCACCAGATTCAGTGATGGGACACGATTTGGACTAGGTGCAGAGGTTGGAATTAGTACGAGCAGGATTCATGCTCGAGGTCCAGTAGGAGTTGAGGGATTGTTAACAACAAGATGGATACTAAAAGGAAGGGGACAAATAGTAGATGGTGATAGAGGGGTTGTCTACACCCACAAAGACATTGCAGCTTAA 2184 0.4368 MEGAVDPSRSFMKNVKRVIIKVGTAVVTRNDGRLAVGRLGALCEQIKQLNSLRYDIILVSSGAVGIGRQRLRFRKLLNSSFSDLQKPEHELDGKACAAVGQNSLMALYDTLFTQLDVTSAQLLVTDNDFRDEDFRKQLTETVKSLLALKVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPTDPQSKLIHTYNKERHQSEITFGDKSRVGRGGMTAKVKAAVNAAEAGIPVVITSGFAAENIINVLQGQCIGTLFHKDAHEWAQVKEVDAREMAIAARECSRRLQALSSDERKQILYKIADALEANEKIITTENEADVTTAQEAGYEKSLVDRLALKPGKIASLANNMRIIANMEDPICRVLKRTELADGLILEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPDTVGGKLIGLVTSREEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANLEMARRIVLDAKIDYPAACNAMETLLIHRDLIEKSWLNDIVLDLQTEGVILFGGPIASSLLNVPQAHSFHHEYSSLACTVEIVDDVYAAIDHINLYGRHVVVFCLIGNIAHTDSIIAEDNEVASVFLRQVDSAAVFHNASTRFSDGTRFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGRGQIVDGDRGVVYTHKDIAA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00406 727 Hamap Gamma-glutamyl phosphate reductase [proA]. 295 712 IPR000965 GO:0004350|GO:0006561
Spst8g00406 727 Gene3D - 6 290 IPR036393 -
Spst8g00406 727 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 5 726 - -
Spst8g00406 727 NCBIfam glutamate-5-semialdehyde dehydrogenase 303 701 IPR000965 GO:0004350|GO:0006561
Spst8g00406 727 Hamap Glutamate 5-kinase [proB]. 16 285 IPR005715 GO:0005737|GO:0006561
Spst8g00406 727 Pfam Amino acid kinase family 16 261 IPR001048 -
Spst8g00406 727 ProSitePatterns Glutamate 5-kinase signature. 233 250 IPR019797 GO:0004349|GO:0006561
Spst8g00406 727 Pfam Aldehyde dehydrogenase family 287 559 IPR015590 GO:0016491
Spst8g00406 727 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 710 IPR016162 GO:0016491
Spst8g00406 727 SUPERFAMILY Carbamate kinase-like 16 281 IPR036393 -
Spst8g00406 727 FunFam Delta-1-pyrroline-5-carboxylate synthase 513 670 - -
Spst8g00406 727 NCBIfam delta l-pyrroline-5-carboxylate synthetase 9 725 IPR005766 GO:0003824|GO:0006561
Spst8g00406 727 CDD ALDH_F18-19_ProA-GPR 297 707 IPR000965 GO:0004350|GO:0006561
Spst8g00406 727 FunFam Delta-1-pyrroline-5-carboxylate synthase 5 288 - -
Spst8g00406 727 SUPERFAMILY ALDH-like 295 711 IPR016161 GO:0016491
Spst8g00406 727 PIRSF P5C_synthetase 1 727 IPR005766 GO:0003824|GO:0006561
Spst8g00406 727 NCBIfam glutamate 5-kinase 16 290 IPR005715 GO:0005737|GO:0006561
Spst8g00406 727 PRINTS Glutamate 5-kinase family signature 53 67 IPR001057 GO:0005524|GO:0016301
Spst8g00406 727 PRINTS Glutamate 5-kinase family signature 97 125 IPR001057 GO:0005524|GO:0016301
Spst8g00406 727 PRINTS Glutamate 5-kinase family signature 235 255 IPR001057 GO:0005524|GO:0016301
Spst8g00406 727 PRINTS Glutamate 5-kinase family signature 137 158 IPR001057 GO:0005524|GO:0016301
Spst8g00406 727 PRINTS Glutamate 5-kinase family signature 176 203 IPR001057 GO:0005524|GO:0016301
Spst8g00406 727 FunFam Delta-1-pyrroline-5-carboxylate synthase 286 405 - -
Spst8g00406 727 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 513 670 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00406 Spst-Chr8 3900337 3915902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00406 K12657 - gmx:100809989 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00406 8 3900337 3915902 Spst8g00406 8 3900337 3915902 ECH
Spst8g00406 8 3900337 3915902 Spst8g00406 8 3900337 3915902 PCT