Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00389 ATGGCAGATAATTTGGAAGCAATAGATGTGGAACCTTCAATGGGCATGTCTGGAGCACACAAAGTTACGTGTGGTAACAAATCCCCCTTAAAACTTATGGATCAGGAAAAGGCTTCAACACCAACCTCAAGTTCTATGGCTGTAGCCTCAAAAGACTTGTGCTGTATTTGCTTGCTCTACCACTCTGAGTACAACACTGCCATGGCTGCCGCAGTCTCCACCATTGGAGCTGTTAACGGAGCTCCACTGAGCTTGAACAGCTCTGGAGCTGGAGCTTCAGTTCCCAGTTCAGCCTTTTTCGGCAGCAGTTTGAAGAAGGTTACTGCCTCAAGGGTCCCTAACACCAAAATATCCTCTGGAAGTTTCAAAATTGTTGCTGCAAAAGAGACTGATGAGAGCCAGCAGACTGATACGGACAGATGGAGAGGTCTTGCCTACGATATTTCTGATGATCAGCAAGACATCACAAGGGGGAAGGGTATGGTTGATCCCCTTTTCCAAGCTCCAGTGGATACTGGAACTCACTATGCAGTCATGAGCTCTTACGAGTACCTTAGCACTGGACTTAAACAGTACAACATGGATAACGACGTGGACGGTCTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAATTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGGTCAAGGAAAATCCTTCCAATGCGAGCTTGTCTTTGCCAAGATGGGAATCAACCCTATCATGATGAGTGCTGGAGAGTTGGAGAGTGGAAACGCAGGAGAGCCAGCAAAGTTGATCAGGCAAAGGTACCGTGAAGCTGCTGATATAATAAAGAAGGGGAAGATGTGCTGTCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGACTTGGTGGAACCACTCAGTACACTGTGAACAACCAGATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCCACAAATGTTCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCCCGTGTGCCCATCATCGTCACCGGTAACGATTTCTCAACACTGTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCACCTACAAGGGACGACCGAATTGGTGTTTGCAAGGGAATTTTCCGCACTGACAATGTTCCTGCGGATGACATTGTCAAGCTTGTTGACACCTTCCCTGGACAATCCATTGATTTCTTTGGTGCACTCAGGGCTAGAGTATATGATGATGAAGTGAGAAAGTGGATTTTTGGTGTTGGTGTTGAGTTGATTGGGAAGAAGCTTGTGAACTCAAAAGAAGGACCTCCAAAATTTGAGCAGCCCAAGATGACTTTGGGTAAGCTCTTGGAGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTCCAACTGGCAGACAAGTACTTGAACGAGGCTGCTCTTGGTGAAGCTAACGAAGATGCCATTAAAAGAGGAACTTTCTATGGCAAAGCAGCACAGCAAGTAAACATTCCCGTTCCTGAAGGTTGTACTGATCCAAGTGCCACAAACTTCGACCCAACTGCAAGAAGTGATGATGGAACCTGCTTATACACCCCCTGA 1635 0.4661 MADNLEAIDVEPSMGMSGAHKVTCGNKSPLKLMDQEKASTPTSSSMAVASKDLCCICLLYHSEYNTAMAAAVSTIGAVNGAPLSLNSSGAGASVPSSAFFGSSLKKVTASRVPNTKISSGSFKIVAAKETDESQQTDTDRWRGLAYDISDDQQDITRGKGMVDPLFQAPVDTGTHYAVMSSYEYLSTGLKQYNMDNDVDGLYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRTDNVPADDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWIFGVGVELIGKKLVNSKEGPPKFEQPKMTLGKLLEYGNMLVQEQENVKRVQLADKYLNEAALGEANEDAIKRGTFYGKAAQQVNIPVPEGCTDPSATNFDPTARSDDGTCLYTP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00389 544 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 193 377 - -
Spst8g00389 544 MobiDBLite consensus disorder prediction 521 544 - -
Spst8g00389 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 401 IPR027417 -
Spst8g00389 544 PANTHER - 83 542 IPR044960 -
Spst8g00389 544 Gene3D - 378 490 - -
Spst8g00389 544 Pfam ATPase family associated with various cellular activities (AAA) 233 374 IPR003959 GO:0005524|GO:0016887
Spst8g00389 544 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 378 490 - -
Spst8g00389 544 Gene3D - 193 377 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00389 Spst-Chr8 3797537 3801266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00389 - - gmx:100789921 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00389 8 3797537 3801266 Spst8g00389 8 3797537 3801266 ECH