LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g00353	ATGGGAAAGTCAACGGCGTGTTTGATTGGTGCCATTGTGATCCTGTGGTGCTGCATAACCCATGTCATGTCTGATGCATCGGATCACCGTTACAGCAAAGGAGATTCCGTTCCCTTTTATGCCAACAAGGTGGGACCCTTTCACAATCCCAGTGAGACATACAGATATTTTGATCTTCCCTTTTGCTCACCAGCTAATGTGGAAGAAAAAAAGGAAGATCTCGGTGAAGTTTTGAATGGGGATCGATTAGTTGTTGCTCCTTACAAACTGGACTTCCAAATTGACAAAGAACCTGAAAGTATCTGCAAAAAGAGGCTTTCAATAAAAGAGGTTGCTCAATTCAGACATGCTGTCTTGAAGGACTATTTTTACCAAATGTACTATGATGACTTGCCCATTTGGGGTTTCCTTGGAAAATTTGACAGTGAAGACAAGGATGAGCCAACCGGGGTCACAGTCCATCTTTTCACGCATGTCCATTTTGAGATTCTGTACAATAAGGATCGCATCATTGATGTTTTCATTCGAAACGATCCACGTGCAGTTGTGGACCTGACAGAAAATAGAGAAGTAGATGTGAACTTCATATATTCTGCCAAATGGATTGAAACCGATACTCCATTTGAGAAGAGGCTGGAGAAGTACTCGCAAACGTCCTCACTGTCACATAACTTGGAAATCCATTGGTTTTCTGTCATCAATTCATGTGTAACTGTTCTCCTCCTGACTGGATTCCTCGCCATAATTCTCATGCGTGTTCTCAAGAATGATTTTGTTAAGTTTACTCCTGATGAGGAAGCAGTTGATGACCAGGAGGAAAGTGGATGGAAATATATCCATGGTGATGTGTTCAGGTACCCAAGGTTCAAGTCTTTGTTTGCAGCAGCACTTGGAACAGGAACCCAGCTCTTTACACTTGCAATATTCATCTTTATGCTTGCTCTAGTTGGGGTTTTCTATCCATACAATAGGGGATCTTTGTTTACTGCACTGGTGGTCATATATGCACTAACGTCCGGCATCGCAGGCTACTATGCAGCTTCCTTTTATTACATGATTGAAGGCAAAAACTGGGTGAAAATTTTGGTGTTGACTGGAAGTTTGTTCTCTGGACCTTTGTTTTTCACATTCTGCTTTCTTAATACTGTTGCACTTGCCTATAACACCACTGCAGCACTTCCATTTGGAACAATTGTGGTTATTTTCCTCATATGGACTCTTGTAACCTCACCTTTGCTAGTACTGGGAGGGATTGCTGGTAAGAATAGCCAATCAGGGTTTCAAGCTCCTTGCCGCACCAATAAGTATCCTAGGGAGATACCCCAACTACCTTGGTACCGTACAACTCTTTCTCAAATGGCTATGGCAGGTTTTTTGCCGTTTAGTGCCATTTACATTGAACTCTACTACATATTTGCTAGTGTGTGGGGCCACCAAATTTACACCATATACAGCATTTTGTTTATTGTTTTCCTCATCCTATTGATTGTCACTGCGTTTGTCACTGTGGCATTGACATACTTTCAGCTTGCCACCGAGGACCATGAATGGTGGTGGAGGTCTTTCCTTTGTGGTGGATCAACTGGCTTGTTCATATATGGGTACTGCTTGTATTACTATTATGAAAGATCAGATATGTCTGGCTTCATGCAAACCTCTTTCTTTTTTGGCTACATGGCTTGCATTTGCTATGGTTTCTTTCTCATGCTTGGAACAGTGGGATTCCGTGCTGCTTTGATCTTTGTCCGTCACATATATCATTCTATCAAATGTGAATAA	1779	0.4188	MGKSTACLIGAIVILWCCITHVMSDASDHRYSKGDSVPFYANKVGPFHNPSETYRYFDLPFCSPANVEEKKEDLGEVLNGDRLVVAPYKLDFQIDKEPESICKKRLSIKEVAQFRHAVLKDYFYQMYYDDLPIWGFLGKFDSEDKDEPTGVTVHLFTHVHFEILYNKDRIIDVFIRNDPRAVVDLTENREVDVNFIYSAKWIETDTPFEKRLEKYSQTSSLSHNLEIHWFSVINSCVTVLLLTGFLAIILMRVLKNDFVKFTPDEEAVDDQEESGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLAIFIFMLALVGVFYPYNRGSLFTALVVIYALTSGIAGYYAASFYYMIEGKNWVKILVLTGSLFSGPLFFTFCFLNTVALAYNTTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSGFQAPCRTNKYPREIPQLPWYRTTLSQMAMAGFLPFSAIYIELYYIFASVWGHQIYTIYSILFIVFLILLIVTAFVTVALTYFQLATEDHEWWWRSFLCGGSTGLFIYGYCLYYYYERSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRAALIFVRHIYHSIKCE	592

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g00353	592	Pfam	Endomembrane protein 70	53	549	IPR004240	GO:0016020
	Spst8g00353	592	PANTHER	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	23	592	IPR004240	GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst8g00353	Spst-Chr8	3394411	3397725	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst8g00353	22	592	Miscellaneous Gene Families	AT2G01970	78.984	0.0	935

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g00353	-		K17085	gmx:100794738	1134.78