Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00331 ATGTCGTTACTATCCGATCTGATGAACCTTAACCTCTCCCACATCACCGACAAGACAAGCATTGCAGTATGGCATTCTACTACATGTTCTTATGTGGATGGATGTACCAGTGCTGCAATAATTTTCTTGATGTACTTGAATAATACTGTGTTTGTTTATACTTATTATGACAGGGTTGGGGGATCTGGTTTGGACATGAGAAGTAAAGCACGGACTCTTTCAGGTCCGGTTAATGACCCTTCCAAGCTTCCCAAATGGAACTATGATGGTTCCAGCACTGGTCAAGCTCCTGGAGCAGATAGTGAAGTGATCTTACATCCAAGAGCAATTTTCAATGATCCGTTCAGGAGGGGTAAAAATATTCTGGTTATGTGTGATACTTACACTGCTGCTGGGGAACCCATTCCTACCAACAAGAGACATAACGCAGCAAAGATATTTAGCCATCCTGATGTTCTTGCTGAAGAACCCTGGTATGGCATTGAGCAAGAATACACCTTGTTGCAGAAAGATGTCCGTTGGCCACTTGGATGGCCTATTGGTGGCTTTCCTGGGCCCCAGGGACCATACTATTGTGGTATTGGTGCTGACAAGGCTTTCGGACGCGATATTGTGAACTCTCATTTCAAAGCCTGCCTTTATGCAGGCATTAACATTACTGGAATTAATGGAGAAGTGATGCCTGATCAAGGGTTAATTGACAATGTCATTAATTCAATAAGGCCTGTTAAGAGTCTATTGGTGTGGGAATTCCAAATTGGTCCATCCGTTGGCATCTCTGCGTGTGACGACTTGTGGGTTGCCCGCTACATTTTGGAGAGGATCACCGAGATTGCTGGGGTGGTGCTTTCGTTTGATCCTCAACCGATTAAGTCCATGAGAAATGATGGTGGCTTTGAAGTCATCAAAGAAGCAATCTCTAAGTTGGAAAAGAGGCACAAGGAGCACATTGCTGCTTACGGAGAAGGCAATGAACGTCGTTTGACAGGAAAACATGAGACAGCTGACATTAACACCTTTCTATGGGGTGTTGCAAACCGTGGTGCTTCTATCAGAGTAGGGAGGGACACAGAGAAGGCAGGGAAGGGATACTTTGAGGATAGAAGGCCTGCATCTAATATGGACCCTTATGTCGACCTACTTATGGCACGAAGGAAATCAGAGGCACAGGACTCAATTGACTAA 1185 0.4481 MSLLSDLMNLNLSHITDKTSIAVWHSTTCSYVDGCTSAAIIFLMYLNNTVFVYTYYDRVGGSGLDMRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGADSEVILHPRAIFNDPFRRGKNILVMCDTYTAAGEPIPTNKRHNAAKIFSHPDVLAEEPWYGIEQEYTLLQKDVRWPLGWPIGGFPGPQGPYYCGIGADKAFGRDIVNSHFKACLYAGINITGINGEVMPDQGLIDNVINSIRPVKSLLVWEFQIGPSVGISACDDLWVARYILERITEIAGVVLSFDPQPIKSMRNDGGFEVIKEAISKLEKRHKEHIAAYGEGNERRLTGKHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVDLLMARRKSEAQDSID 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00331 394 SMART Gln_synt_C_2 136 384 IPR008146 GO:0004356|GO:0006807
Spst8g00331 394 PANTHER GLUTAMINE SYNTHETASE 48 378 - -
Spst8g00331 394 Pfam Glutamine synthetase, beta-Grasp domain 64 129 IPR008147 GO:0004356|GO:0006542|GO:0006807
Spst8g00331 394 SUPERFAMILY Glutamine synthetase, N-terminal domain 56 135 IPR036651 GO:0004356|GO:0006542|GO:0006807
Spst8g00331 394 ProSitePatterns Glutamine synthetase signature 1. 88 105 IPR027302 -
Spst8g00331 394 FunFam Glutamine synthetase 137 386 - -
Spst8g00331 394 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 51 132 IPR008147 GO:0004356|GO:0006542|GO:0006807
Spst8g00331 394 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 137 383 - -
Spst8g00331 394 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 139 394 IPR008146 GO:0004356|GO:0006807
Spst8g00331 394 Gene3D - 38 136 IPR036651 GO:0004356|GO:0006542|GO:0006807
Spst8g00331 394 SUPERFAMILY Glutamine synthetase/guanido kinase 136 378 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00331 Spst-Chr8 3001892 3008881 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00331 K01915 - gmx:547798 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02277 1 31533423 31537198 Spst8g00331 8 3001892 3008881 PCT