LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g00271	ATGTCTGACAGGAAAGTTATAAAAAATGCTGTCCATTCCGACACAGATTATCTTTTCCTTGGTGAAGATAAGTACTATATTTTCAAAACTGGCATTTACAAAGTTGGTCGAAAAGGTTGTGATGTGATAATCACTAAAGATAAAGGGGTTTCTAGGGTTCATGCAGAAATAGTTGTTAATACAATGAACCTGGTTATTCCTTTACCAAATGAGCGTTCTCATTTGTCACCAAGTATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAGAATGTTGGGCCCAAGAAAAAAGTTCACGAGCTACCAAACAAAGAAACAGCATTAGAGGATGGCGACCTTGTTTCTTTTGGCACTGGTGCTAGTATTACTCATACCTTACGTGAAGGGTGCACACATGTGCTGGTAGATCAACTTATGCCATTGAAGAAGGATCTTGTTGATGCTGTTGTGGCAAAAAAATCCTGTGTTCTCAAAAATTGGCTTGAGTTTTTAGAAGAAAGGAACATTAGCACCGAAATTCCTAGCTGTCATTCATATATTCCAACAGTGTCATCAGGAGGAGAATCCATTAAAGTTGCTGATCCCACAACCCGAGAAGATTGCTTGAAAGGATACACATTTTTGTTGGAATCTGAGCATTCGTATAAATTTCAGGATCAGCTTAAATCTTTATTAGAAGTGGCTGGTGCAAAAGTTGTTTCCTCTGAAGATTTTTGTTCAAATAGTCAAGGTTTAAATAATAGGGAGGATAATCGTGTGGCTTGTGTCATCCCAGGAGGACCAGCGCGGAAGTCTAATCTCTTCGATAAACTAAGTTCCTTGCCTAGAGTTAGTGAGATGGATATAATATGTGCTGCTTTCAGTGGACAGCTAGATCTGTCTATTTTGAAATCACCATGCATACTTGTTTCGTCATCATGCTCTACAGATGAGACAATAGTAGCAGATTCGGATACTGAAGTTGAAACAGCCACATCACCCCGCCCAAACGAGGCATTCAGCAACGATAATGATGTAAAATATGAAAAAACAGAAGAATTATATGACGATTCTTACACTTTGGATAAGAGAAAACATGAGAGTATAGAGAAATCCACAGATGATGTTTTAACCAGATTGCATGACACTAAACGTGCAAGAACAGAAACATCCTTGGATGGCACTTCTGTTAGATCACATGCTACCAGCTTCAGGCTTGATAATGATGGTGTTAAAGTAAAGAAAGACAAGGTTGATGATAATGGAACTGAAAATTCAGATATTGTTTACAGCCAACAACTAATTGTTCGAGATACAAATATACATGGAAGCAGAAGCACTGCACCGAACAGCAGTGTTCCAAATTTTAAATGTTTCAGAAAGTTACACACTCAATCTGGTAATAGCTTTGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTGACTGTGGGAATGATGAAATGGCCGAGTTAGTGAGGGATGAGAAAAGGCGAAAGAATATGGAAGCTGTCGCAGATGACCTATTTAATAATGAGAAGGCAAGAAAACGAGGCACTTGGGCATGGTGGAATGCTATAGCAGAGATCTTTCTCCAAAGATATGGCTTCAAAGATACTGCACACTTGATGCGTGTCAGGTTGATTTGTTCACTTGTCTGCGTTTTGATCGAGAATGAAAAGAGGTTATTGGCCGTATATGGTGACACTCTTCCTCTTATCTTAGAGAGGCCTCCTGAAGGATCTATTTAG	1746	0.3872	MSDRKVIKNAVHSDTDYLFLGEDKYYIFKTGIYKVGRKGCDVIITKDKGVSRVHAEIVVNTMNLVIPLPNERSHLSPSIHIRDCSKYGTFISKNVGPKKKVHELPNKETALEDGDLVSFGTGASITHTLREGCTHVLVDQLMPLKKDLVDAVVAKKSCVLKNWLEFLEERNISTEIPSCHSYIPTVSSGGESIKVADPTTREDCLKGYTFLLESEHSYKFQDQLKSLLEVAGAKVVSSEDFCSNSQGLNNREDNRVACVIPGGPARKSNLFDKLSSLPRVSEMDIICAAFSGQLDLSILKSPCILVSSSCSTDETIVADSDTEVETATSPRPNEAFSNDNDVKYEKTEELYDDSYTLDKRKHESIEKSTDDVLTRLHDTKRARTETSLDGTSVRSHATSFRLDNDGVKVKKDKVDDNGTENSDIVYSQQLIVRDTNIHGSRSTAPNSSVPNFKCFRKLHTQSGNSFDNLVPFAKYPYKDSDCGNDEMAELVRDEKRRKNMEAVADDLFNNEKARKRGTWAWWNAIAEIFLQRYGFKDTAHLMRVRLICSLVCVLIENEKRLLAVYGDTLPLILERPPEGSI	581

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g00271	581	CDD	FHA_NBN	19	125	-	-
	Spst8g00271	581	MobiDBLite	consensus disorder prediction	321	340	-	-
	Spst8g00271	581	MobiDBLite	consensus disorder prediction	321	336	-	-
	Spst8g00271	581	PANTHER	NIBRIN-RELATED	381	514	IPR040227	GO:0006302\|GO:0007095\|GO:0030870
	Spst8g00271	581	SUPERFAMILY	SMAD/FHA domain	23	126	IPR008984	GO:0005515
	Spst8g00271	581	FunFam	Nibrin	17	128	-	-
	Spst8g00271	581	Pfam	FHA domain	33	120	IPR000253	GO:0005515
	Spst8g00271	581	Gene3D	-	8	131	-	-
	Spst8g00271	581	ProSiteProfiles	Forkhead-associated (FHA) domain profile.	33	92	IPR000253	GO:0005515

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g00271	K10867		-	gmx:100783205	786.563

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst8g00271	8	2366135	2379549	Spst8g00271	8	2366135	2379549	ECH