Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00021 ATGGAGGATGGTGAAAAGGAACAGGTAGCAGAATTTGTATATAGTCTTGCTGTATGGCGCCTTGAAGGCAATCAAGGTGTAGAAACTGTGGGGCCAAAACTTAGATATGTTTGGGAAAAGTTGCCATCTCTAGACTTTGGGAAAGTAGTCATCAAGGGAATGTTTTGGCCTTTGGGAGTTGCAGATATGGTTCTATTTCTATCCACACAGACAGCAGGAGTTGTGTTAGGAATGGGGTTTTATGACATTGGTTGGGAAAGAATGGAACATGCAACACTTTCATGCCTCAAGGAACATGCAAAGCAAGACATTTTGCCTTCCAAATCAGAAGCTAATGTCCAAAACACAACAAACCATGTTGTATATGCACCAACTTCAGCATCTCCATTTCTCAGTCCCACAAAATCCCACCCCAAAGTTGTGTATCCTTCCCCTGATGATCAGGCTCAAGATGAATTGCACAGATGGCCTACTCTTAATGAGGCCATAGCAGAAATCAAGGCAATAGGGATGGTATCAGGTCCAACAGCCATCACTGGTTTAGTCATGTATTCAAGAGCTATGATCTCTATGATTTTCCTTGGCTATCTTGGTGAGATGGAACTAGCCGGAGGATCTCTCTCTATTGGTTTTGCCAACATCACTGGCTACTCTGTGATCTCTGGATTAGCCATGGGGATGGAGCCAATTTGTGGACAAGCTTATGGAGCAAAGCAATGGAAGCTACTTGGCTTGACACTGCAGAGAACTGTGCTCCTTCTCCTCTCAACATCCATCCCCATCTCATTCATGTGGCTCAACATGAAGAGAATCCTCTTGTGGTCAGGCCAAGACCACGAAATAGCATCAGTGGCACAAACTTTCATCGTTTTCTCTATACCTGATCTATTCTTGCTCTCGCTTCTCCATCCTCTAAGAATCTATCTCAGGACTCAAAGTATCACATTGCCATTGACATATTGCTCAACAATCTCTGTTCTTCTCCACGTGCCTCTGAATTTCCTCCTAGTGGTTCATCTCAAGATGGGAATTGCCGGGGTGGCTACGGCAATGGTGGTGACCAACCTCAACCTCATTCTCTTCCTCTCGTCTTTTGTCTACTTCTCCGGTGCATACAAGGCCTCATGGGTTCCCCCCAGTGTGGACTGCATCAAGGGGTGGTCCTCATTGCTATCACTTGCAGTTCCAACCTGTGTCTCAGTTTGCCTTGAGTGGTGGTGGTATGAGTTCATGATAATGCTGTGTGGCCTTTTGGCGAATCCAAAAGCAACCATTGCTTCAATGGGAATCCTTATCCAAACAACATCTTTGGTCTATGTGTTCCCATCATCACTCAGCCTTGGTGTTTCCACAAGAATAGGGAATGAGCTAGGTGCAAACAACCCTGGAAAAGCAAGAGTTTCAATGATAGTGTCACTCTTCTGTGCTGTGGCATTAGGTCTTGCAGCCATGCTGTTCACCACCTTGATGAGGCACCAATGGGGCAGATTCTTCACCAATGATCATGAGATTTTGGAACTCACATCACTAGTGCTGCCAATTGCTGGCCTTTGTGAGCTTGGGAACTGCCCACAGACCACAGGCTGTGGAGTCCTAAGGGGCAGTGCAAGACCTACTATTGGTGCCAACATCAATTTGGGCTCATTTTACTTGGTGGGTATGCCAGTGGCTATCCTTCTGGGCTTTGTGGCCAAAATGGGGTTTGCAGGGCTGTGGCTTGGGTTGCTTGCAGCCCAAGTCTCCTGTGCTGGCAGCATGCTCTATGTTCTTTGCAGAACAGATTGGAATGTGGAAGTAGAAAGAGCCAAGGAACTCACAAAAATAACATCCACAACAACTACCACTTCTTGTTCTGCTGCTTCTGATTCTAACTTTAAATTACCTACACTCACCAAAAAAGAGGCTAACATTAACAAGAATGCTCATGCCTGTCTTGAAGAGATAGTTATTACTGCTGGTGGTGATGACCTTACCAATATATCTTCACTTGAAACAGATCCACTGATCATTCCCACCACCAAACACACTCAAGTTTAG 2037 0.4541 MEDGEKEQVAEFVYSLAVWRLEGNQGVETVGPKLRYVWEKLPSLDFGKVVIKGMFWPLGVADMVLFLSTQTAGVVLGMGFYDIGWERMEHATLSCLKEHAKQDILPSKSEANVQNTTNHVVYAPTSASPFLSPTKSHPKVVYPSPDDQAQDELHRWPTLNEAIAEIKAIGMVSGPTAITGLVMYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISFMWLNMKRILLWSGQDHEIASVAQTFIVFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSTISVLLHVPLNFLLVVHLKMGIAGVATAMVVTNLNLILFLSSFVYFSGAYKASWVPPSVDCIKGWSSLLSLAVPTCVSVCLEWWWYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSSLSLGVSTRIGNELGANNPGKARVSMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDHEILELTSLVLPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILLGFVAKMGFAGLWLGLLAAQVSCAGSMLYVLCRTDWNVEVERAKELTKITSTTTTTSCSAASDSNFKLPTLTKKEANINKNAHACLEEIVITAGGDDLTNISSLETDPLIIPTTKHTQV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00021 678 PANTHER MULTIDRUG RESISTANCE PROTEIN 161 595 - -
Spst8g00021 678 NCBIfam MATE family efflux transporter 184 572 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst8g00021 678 CDD MATE_eukaryotic 165 601 IPR045069 GO:0042910|GO:1990961
Spst8g00021 678 Pfam MatE 396 558 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst8g00021 678 Pfam MatE 175 335 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00021 Spst-Chr8 193547 201603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00021 K03327 - gmx:100783792 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00021 8 193547 201603 Spst8g00021 8 193547 201603 ECH