Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00019 ATGCAAGAGAAGAAAACCCAATCTAACTGCATAGTAGTCTCACCTTGGATCTCTCACAATCATGGCAACCGGTTGGAGAAGAGCCTTTTGCACCAGCGACCCAGAATCCACAATGCACTCCAAACACACAACCCAAACCCCCACTCCTTCGCCCTCGCCCTCGCCCTCGCCCGGAACCAGCGTCAGATTCGGCTTCCTGTCCTTACAAGTAATTGCGGAATCTGTTCGAATAGAGTGAAAACGGGACAGGGAACGGCCGTTTACACTGCAGAGTGCGGTCACGCGTTTCATTTCTCTTGCGTCGTTTGCCATGCACGCACCCACGTTTGCCCCGTCTGTGATGCCACGTGGAACGACGTCCCGTTCCAACAAAACCACGCCCTCGTTCCCACCGTCCCAATTGAAAAACAGAAACAACCTCATTATTCTGATTCGGTAACTTCCTACGACGACGACGAGCCTCTTCCTTCTTCTCTGACGTCCTCCACGCAAATCGTTCCAATCCCCGAAGCCGACGAGAACACCGAAGAAGATGAAGAAGAAAATCACGACGTAATGGAGTTCCCTGGCTTTTTCGTCCATCCAAATCCTCAATCGTCGTTACGACAACACAACGCTGAGTCAAAAACGGTTCGAGTGAAGCTCATGTCGGAGTGCGCGGTCATATCAGTTTCTCAAAGCGTCGAAACTCGTGCTTTGGTTCTACGAGTCAAGGCTCCTCCCCCGTCGCCGCTGCCGCGGCGACTGCTACCAATGGATCTCGTGGCGGTGCTTGACGTTAGCAACGGCATGAACGGCGCTAAGCTTCACATGTTAAAGCGCGCGATGCGATTGGTTGTATCCTCTCTCGGCGCGGCTGACCGGCTCGCCGTCGTGGCCTTCTCGGCTGATTCCAAACGGTTGTTACCTCTGCGCAGAATGACGGCTCAGGGACAGCGCGCGGCTCGGCGCATGGTGGATCGGCTCATCTGTGGTCAAGGAAACAGCGTTGTTCGTGAAGTGGCGATGAAGAAGGCCTCGAAGGTTCTCGAAGATCGTAGAGAGAGAAACCCTCTCGCGAGGATCTTGCTTCTATCGGACGGTCACGACAACAACACGAACAAAAATCAACGGAGATGCTTGAGCCGCGTGTCGTCCACCCGGTTCGACTTTGTCGAAGTTCCGGTTCATTCGTTTGGGTTCGAGATGAAAAAGACCGGTTTAACACACCAACGGTTAGATGATGAGTTTACACAATACGTTAACAGAACATTAAGTGTGACGGTGCAGGATTTGAGAATTCAGCTTGGCTTCTCGGCGCCCGCTGAAATACGAGCCGTTTATTCATGCAGTGGGGGACCCACTGCACTGAGCGCCAACGCGGCTCGGCTTGGTGATTTATACGGCGAAGAAGAGAAGGAGTTGTTGGTGGAGGTTCGAGTACCCACGTCAGCGTTCGGGACCCACCACGTGATGACAGTGCGGTGTTTCAACAAAGACCCAGCATCTCAAAAATTCGTGTACGGTGCGCAACACGCGTTTACGGTGGTGCCGCCTAAGAGTTTTTCACTCTGTGGCGGTAGGGTTGAGCGGCTGAGAAATGTGTTTATAACGAGCCGAGCCGTAGCCGAGTCCCGGAGGCTGGCGAAGCATAACGAGTTTTTGAGCGCTCATCATTTACTTTCTTCTGCACGCGCGCTTTTGGCGCAGTTCGGCTCGGCTGAGGAGTACGTACGCAGCTTGGATGCCGAACTTGGGGAGCTTCAATGGCGGAGGCAGCACCGGGAGACGGTGGGGACGGGGAGGAGGAGTGAACGTGAGGTGAGGTTGGTGAATGATTGCGGCGAAGCGTGGACGCCAACATCAGCTTGGAGAGCCGCTGAGAAGCTGGCTAAAATGGCTAGGATGAAGAAGTCGTTGAATAAAGTTAGCGACTTGCACGGCTTCGAGAATGCTAGGTTTTGA 1944 0.5376 MQEKKTQSNCIVVSPWISHNHGNRLEKSLLHQRPRIHNALQTHNPNPHSFALALALARNQRQIRLPVLTSNCGICSNRVKTGQGTAVYTAECGHAFHFSCVVCHARTHVCPVCDATWNDVPFQQNHALVPTVPIEKQKQPHYSDSVTSYDDDEPLPSSLTSSTQIVPIPEADENTEEDEEENHDVMEFPGFFVHPNPQSSLRQHNAESKTVRVKLMSECAVISVSQSVETRALVLRVKAPPPSPLPRRLLPMDLVAVLDVSNGMNGAKLHMLKRAMRLVVSSLGAADRLAVVAFSADSKRLLPLRRMTAQGQRAARRMVDRLICGQGNSVVREVAMKKASKVLEDRRERNPLARILLLSDGHDNNTNKNQRRCLSRVSSTRFDFVEVPVHSFGFEMKKTGLTHQRLDDEFTQYVNRTLSVTVQDLRIQLGFSAPAEIRAVYSCSGGPTALSANAARLGDLYGEEEKELLVEVRVPTSAFGTHHVMTVRCFNKDPASQKFVYGAQHAFTVVPPKSFSLCGGRVERLRNVFITSRAVAESRRLAKHNEFLSAHHLLSSARALLAQFGSAEEYVRSLDAELGELQWRRQHRETVGTGRRSEREVRLVNDCGEAWTPTSAWRAAEKLAKMARMKKSLNKVSDLHGFENARF 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00019 647 SUPERFAMILY RING/U-box 67 125 - -
Spst8g00019 647 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 71 642 - -
Spst8g00019 647 ProSiteProfiles VWFA domain profile. 253 394 IPR002035 -
Spst8g00019 647 Pfam von Willebrand factor type A domain 254 362 IPR002035 -
Spst8g00019 647 Pfam RING-like zinc finger 71 101 IPR001841 -
Spst8g00019 647 Gene3D von Willebrand factor, type A domain 253 417 IPR036465 -
Spst8g00019 647 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 219 IPR013083 -
Spst8g00019 647 MobiDBLite consensus disorder prediction 138 162 - -
Spst8g00019 647 SMART ring_2 72 113 IPR001841 -
Spst8g00019 647 MobiDBLite consensus disorder prediction 136 162 - -
Spst8g00019 647 SMART VWA_4 251 426 IPR002035 -
Spst8g00019 647 SUPERFAMILY vWA-like 251 376 IPR036465 -
Spst8g00019 647 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00019 Spst-Chr8 168156 170304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00019 - - gmx:100795015 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00019 8 168156 170304 Spst8g00019 8 168156 170304 ECH