Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00002 ATGGAAGCTGTGCCGGATCAAGACACTAGTATATGCACTCACTGTGATCGGGCCATCCCTGCTGCAAATATTGACTTGCATTATGCTCATTGCTCTCGGAAACTTGAAAAATGCAAAATTTGTGGTGATATGGTTCCTAGAAAAAATGCAGAGGACCATTATTTAAGCACCCATGCACCGGTTTCTTGTTCATTATGCAGTGAGACAATGGAGCGTGATATATTAGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATTGTCACTTGTGAGTTCTGTGAGTTTCCATTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTTCGTGAAAGATTCAGCCATGAAGCTCGGTGCAATGGCATTATCCAAGATAGTTCTGTGGGCCCTTCAAGGAATGTGAGGGACGCTGATGGAGAGCAAGATGCTAGAAGAAGGCCACAGAATGACTTCTCAACTAAACGCCTTCTTTTCACAATAGCCATCACTGGTATTGCTGTCATACTGGGATCCTTTTTTCTACAGAGGAAGGCAGAGCCCAGTGATGTGCATTAG 603 0.4328 MEAVPDQDTSICTHCDRAIPAANIDLHYAHCSRKLEKCKICGDMVPRKNAEDHYLSTHAPVSCSLCSETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERFSHEARCNGIIQDSSVGPSRNVRDADGEQDARRRPQNDFSTKRLLFTIAITGIAVILGSFFLQRKAEPSDVH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00002 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 57 IPR013083 -
Spst8g00002 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 112 IPR013083 -
Spst8g00002 200 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 6 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00002 Spst-Chr8 5544 9496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00002 - - gmx:100811867 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00002 8 5544 9496 Spst8g00002 8 5544 9496 ECH