Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01185 ATGATCGCAGATCCCGTTAATTTTCTACCCGTACCCGATCGGGTTTGGATTCTGAAGAAGAAAACTCAATTACGCAAAATTCCGAGGCATTGCTGCTGTCCTGGCTTTCGTATGGGTAAGATTCTGAGAGAAACCGCGAGGCCGTCCTTTAGTTGTTCGTCGGCGTCACCGTCGTCCGCGCCACCGGCAACGACGTCGTCGACGTCGGTGACCGACACGGTGAAGGGATCGCACCGGTTCAAGATCACGGGGTATGCTCTGTCGAAGGGGATTGGGATTGGGAAGTACATAGCGTCGGATATATTTTCGGTGGGAGGGTACGATTGGGCAATCTATTTTTACCCTGATGGGAAGAGCGTGGAGGACAATGCTACGTACGTTTCGCTCTTTATCGCGCTCGCTAGCGAAGGGACGGATGTTCGGGCGCTTTTTGAGTTGACCCTTTTAGATCAGAGTGGGAAGGAGAGGCATAAGGTGCATAGCCATTTCGAGAGGACCCTCGAGAGTGGACCCTACACGTTAAAATACCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTACCTTAAGGACGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAATCACACACAGAGGGCCCTAAAATATATAAAATTCCAATTATGCCTTCTAACATTGGTCAGCAACTTGGGAAGCTATTAGAAAGTGGGAAAGGCAGTGATGTGAGTTTTGAAGTGAATGGAGAAATTTTTGCCGCTCATAAATTGATATTAGCTGCTCGCTCACCTGTTTTCAGGGCCCAACTTTTTGGTCCTATGAAAGATCAGAATACCCATTGTATAAAAGTTGAAGACATGGAGGCTCCAGTTTTTAAGGCATTGCTTCATGTTATATATTGGGATTCACTACCTGACATGCAAGAGCTTACTGGGTTGAACTCAAAAGGGGCTACTACATTGATGGCTCAGCATCTACTAGCAGCAGCTGATCGGTATGGCTTAGAGAGACTTAGGCTGATGTGTGAAACAAGTCTCTGTGACGATGTTGCAATAAACACTGTTGCTACGACTCTAGCCTTGGCAGAGCAGCACCATTGCTTCCAACTGAAAGCAGTCTGTCTGAAATTTGTTGCACGGCCTGAAAATCTCAGAGCTGTGATGCAAACCGATGGTTTTGAGTACTTGAAAGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTAGAGTACGTGGCTAGATGTACCGAGCATTCAGACTACTTGTGCAAACATAGGAATGAAGCAATACTTGATGGCAGCGACATAAATGGAAGGCGGGTGAAGCCAAGGCTATAG 1347 0.4647 MIADPVNFLPVPDRVWILKKKTQLRKIPRHCCCPGFRMGKILRETARPSFSCSSASPSSAPPATTSSTSVTDTVKGSHRFKITGYALSKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIMPSNIGQQLGKLLESGKGSDVSFEVNGEIFAAHKLILAARSPVFRAQLFGPMKDQNTHCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGLNSKGATTLMAQHLLAAADRYGLERLRLMCETSLCDDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARCTEHSDYLCKHRNEAILDGSDINGRRVKPRL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01185 448 CDD BACK_AtBPM-like 351 414 IPR034090 -
Spst7g01185 448 FunFam BTB-POZ and math domain 1 354 431 - -
Spst7g01185 448 CDD BTB_POZ_BPM_plant 231 351 - -
Spst7g01185 448 SUPERFAMILY TRAF domain-like 72 211 - -
Spst7g01185 448 SUPERFAMILY POZ domain 222 352 IPR011333 -
Spst7g01185 448 FunFam BTB-POZ and math domain 1 221 348 - -
Spst7g01185 448 ProSiteProfiles MATH/TRAF domain profile. 75 209 IPR002083 GO:0005515
Spst7g01185 448 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 65 412 IPR045005 GO:0016567
Spst7g01185 448 SMART math_3 80 192 IPR002083 GO:0005515
Spst7g01185 448 Gene3D - 354 430 - -
Spst7g01185 448 Pfam BTB/POZ domain 236 352 IPR000210 GO:0005515
Spst7g01185 448 CDD MATH 76 209 IPR002083 GO:0005515
Spst7g01185 448 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 73 214 IPR008974 GO:0005515
Spst7g01185 448 MobiDBLite consensus disorder prediction 52 71 - -
Spst7g01185 448 ProSiteProfiles BTB domain profile. 245 304 IPR000210 GO:0005515
Spst7g01185 448 SMART BTB_4 245 354 IPR000210 GO:0005515
Spst7g01185 448 Gene3D Potassium Channel Kv1.1; Chain A 221 349 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01185 Spst-Chr7 36419334 36425356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01185 K10523 - gmx:100799666 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01185 7 36419334 36425356 Spst7g01185 7 36419334 36425356 ECH
Spst1g03233 1 40865294 40869631 Spst7g01185 7 36419334 36425356 PCT