Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01020 ATGTCCTACACCTTTGTGTATTGGCAACAAGTTTATGGATTGATTCCACCAAAAGAATTAAAAGGGTTAGATAAGAATTGTGAATATTCAAGCATGGATGAAGCTAAAAGAATGGAAGAAGGGTTCACCACACCCTATAATGATAACCGTAAGGGTGAGTTGAAACAGGAAATTGAAAAAACCAATGGTGATGGAGATTCCATTGAGCATGACAGAGACACAAGGAGTAGCACACAAGAGGGTGAGACCGTTGAACAAATAGTGGAGCAAGAGCAACCATCGGTGAAGCAAAAGACAAAAAGAGTTGCAACCCTTGATGCATTTAGGGGTCTCACCATTGTGCTGATGGTACTAGTAGACGATGCTGGTGGAGCTTACCCACGCATTGATCACTCTCCGTGGAATGGATGTACATTAGCTGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGTGTTGCCATAGCCCTTGCACTGAAGAGAATACCCAAGATTAAGGATGCCGTGAAGAAGATAATCCTTAGGACATTGAAGCTTCTCTTCTGGGGCATTCTTTTGCAAGGTGGATACTCCCATGCACCTGATGATCTCTCATATGGAGTTGACATGAGATTTATAAGATGGTGTGGCATTCTCCAGAGAATAGCCCTTGTATACTGTGTTGTTGCTCTAATAGAGACATACACCACCAAGCTTAGACCCTCTACCCTGAAGCCAGGACACATATCCATTCTTAGTGCCTATCGATGGCAATGGTTTGGGGGGTTTGTAGCATTTGTGATTTACATGGCTACAACCTTCAGCCTCTACGTTCCAGATTGGAGTTTCGTGGATTATAACAGCCACGAACCAAAGAGATACACAGTCCAATGTGGGATGCGAGGACACCTAGGTCCTGCATGTAACGCTGTTGGTTACGTAGATAGACAAGTTTGGGGCGTTAATCATCTTTATTCCCAACCTGTTTGGACTCGCTTGAAGGCATGCACAGTGAGTTCTCCAGCTGAAGGGCCCCTCCGTCAGAATGCTCCATCTTGGTGTCGCGCACCCTTTGAACCGGAGGGTTTGTTAAGTTCCATATCAGCTATCCTCTCTGGCACCATTGGCATCCACTATGGGCATGTCTTGATTCACTTCAAGGGTCATTGGGAGAGACTCAAGCAATGGCTCTCATTAGGGTTTGTGTTATTGACCCTAGGCATCACCCTTCATTTTACACATGCCATCCCAATGAACAAGCAACTCTACAGCTTCAGCTATGTTTGTTTCACAGCAGGGGCAGCTGGAATTGTGTTCTCTGCATTCTACTTACTGATAGATGTTTGGGGGTTTCGAACTCCATTCTTGCTCTTGGAATGGATAGGAATGAATGCAATGCTAGTGTTTGTTATGGCAGCACAGGGCATCTTTGCAGCATTTGTGAATGGATGGTATTACAAGGATCCAGATAACTCATTAGTAAACTGGATTCAGAATCATGTGTTTATCAATGTTTGGCACTCAGAGAGGTTGGGAACTCTGTTATATGTCATCTTTGCAGAAATCACTTTCTGGGGTGTGGTGGCCGGTATCTTGCACAAATTAGGAATATACTGGAAACTGTAG 1605 0.4405 MSYTFVYWQQVYGLIPPKELKGLDKNCEYSSMDEAKRMEEGFTTPYNDNRKGELKQEIEKTNGDGDSIEHDRDTRSSTQEGETVEQIVEQEQPSVKQKTKRVATLDAFRGLTIVLMVLVDDAGGAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKIKDAVKKIILRTLKLLFWGILLQGGYSHAPDDLSYGVDMRFIRWCGILQRIALVYCVVALIETYTTKLRPSTLKPGHISILSAYRWQWFGGFVAFVIYMATTFSLYVPDWSFVDYNSHEPKRYTVQCGMRGHLGPACNAVGYVDRQVWGVNHLYSQPVWTRLKACTVSSPAEGPLRQNAPSWCRAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHWERLKQWLSLGFVLLTLGITLHFTHAIPMNKQLYSFSYVCFTAGAAGIVFSAFYLLIDVWGFRTPFLLLEWIGMNAMLVFVMAAQGIFAAFVNGWYYKDPDNSLVNWIQNHVFINVWHSERLGTLLYVIFAEITFWGVVAGILHKLGIYWKL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01020 534 MobiDBLite consensus disorder prediction 58 92 - -
Spst7g01020 534 PANTHER LD22376P 79 520 - -
Spst7g01020 534 MobiDBLite consensus disorder prediction 58 79 - -
Spst7g01020 534 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 101 229 IPR012429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01020 Spst-Chr7 18175685 18179501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01020 K10532 - gmx:100809725 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01020 7 18175685 18179501 Spst7g01020 7 18175685 18179501 ECH
Spst7g01020 7 18175685 18179501 Spst1g02861 1 37209706 37213556 PCT