Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00833 ATGGCTCTTATACCTCTCTTTGCTATTTTATTCTTTATGGCCTCCCCAAGCAATTCCTACTGGCCACCATCACCTAGTTACAGGCCAAGTTCCAAATTCAGGCCTGTGAACTTCTACAAAGGGTTTAGAAATCTTTGGGGTCCTCAGCACCAAAGCATTGACCAAAATGCATTAACAATATGGCTTGATCGAACCTCAGGAAGTGGCTTCAAGTCAGTTCGTCCATTTCGATCTGGGTACTTTGGTTCTTCTATTAAGCTCCATCCTGGCTATACTGCTGGAGTTATAACAGCTTTCTATCTTTCTAACAACGAGGCACATCCAGGCTTCCATGATGAAGTGGACATTGAGTTTCTTGGGACGACATTCGGAAAGCCTTACACTTTACAGACCAATGTTTATATAAGAGGAAGTGGGGATGGCACAATTATTGGAAGAGAAATGAAGTTCCACCTTTGGTTTGATCCGACACAAAATTTTCATCACTATGCTATTCTTTGGAGTCCTAAGGAAATAATATTCCTTGTGGATGATATTCCCATAAGGAGGTACCCAAGAAAAAGTGCTGAAACATTTCCACTACGACCAATGTGGCTTTATGGTTCAATATGGGATGCCTCATCATGGGCAACAGAAGATGGAAAGTACAAAGCTGATTATAGATACCAACCTTTTGTTGCAAGGTACACCAACTTCAAGGTTGGTGGTTGCTCAGCCTATGCCTCTCGTTGGTGCCATCCAGTCTCAGCTTCACCATATCGTTCTGGTGGCTTGACCAGACGCCAATATTGGACCATGAGATGGGTGCAAAAATACCACATGGTCTATAACTATTGCCAGGATCCCAAAAGAGACCATAGACTAACACCTGAGTGTTGGGGGTAA 885 0.4305 MALIPLFAILFFMASPSNSYWPPSPSYRPSSKFRPVNFYKGFRNLWGPQHQSIDQNALTIWLDRTSGSGFKSVRPFRSGYFGSSIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGTIIGREMKFHLWFDPTQNFHHYAILWSPKEIIFLVDDIPIRRYPRKSAETFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKVGGCSAYASRWCHPVSASPYRSGGLTRRQYWTMRWVQKYHMVYNYCQDPKRDHRLTPECWG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00833 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 37 292 IPR044791 GO:0004553
Spst7g00833 294 Pfam Glycosyl hydrolases family 16 40 221 IPR000757 GO:0004553|GO:0005975
Spst7g00833 294 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 255 292 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Spst7g00833 294 FunFam Xyloglucan endotransglucosylase/hydrolase 25 293 - -
Spst7g00833 294 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 280 IPR013320 -
Spst7g00833 294 Gene3D - 18 292 - -
Spst7g00833 294 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 229 IPR000757 GO:0004553|GO:0005975
Spst7g00833 294 PIRSF EndGlu_transf 6 294 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00833 Spst-Chr7 8956431 8958192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00833 1 292 Glycoside Hydrolase AT3G44990 63.481 5.30e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00833 K08235 - gmx:100813742 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00833 7 8956431 8958192 Spst7g00833 7 8956431 8958192 ECH
Spst1g02865 1 37249711 37251537 Spst7g00833 7 8956431 8958192 PCT