Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00778 ATGGCGGCCATAACCCGCCTCGCCAAGCGCGCGTCCTTCGTCTCTTCGCTCGCCACCCGAACCCTCACCTCTTCCCAAGTCAACGCGCCGCCGCATGCCGCTGCGACCTTCCGCCGGTTTCCGCCGCGCGACAACCCGAGCAAGAGGTGTGTGCAGTGGGTTTTCCTCGGGTGCCCCGGCGTCGGCAAAGGCACCTACGCCAGCCGCCTCTCCAACCTCCTCGCCGTCCCGCACATCGCCACCGGCGATCTCGTCCGCGACGAACTCGCCTCCTCTGGCCCCTTCTCTTCCAAGCTATCAGATATTGTAAATCAAGGTCAATTGGTGTCAGATGAAATTATAATAAGTTTATTGTCAAAAAGACTTGGTGCTGGAGAAGCTAAAGGCGAATTGGGATTTATCCTTGATGGTTTTCCTCGAACAATAAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTACGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGAAATTTCAATGTTGCTTCCATTGACATCAAGGCTGAGAATGGGAGCCCTGGAATTATTATGGCTCCACTTCTTCCTCCTGTGAATTGTATGTCAAAGCTCATTACTCGATCAGATGATACTGAAGCTGTAGTCAAAGAAAGGCTTCGAATATACCATGAAATGACTCAGCCTGTGGAGGAATTTTACCGTAGCAGAGGAAAACTATTGGAGTTTAACCTGCCTGGGGGAATCCCAGAATCTTGGCCTAAGTTGCTACAAGTTCTTAATCTTGACGATTGTGAGGACAAACGATCTGCTGCAGCATAA 852 0.5 MAAITRLAKRASFVSSLATRTLTSSQVNAPPHAAATFRRFPPRDNPSKRCVQWVFLGCPGVGKGTYASRLSNLLAVPHIATGDLVRDELASSGPFSSKLSDIVNQGQLVSDEIIISLLSKRLGAGEAKGELGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKAENGSPGIIMAPLLPPVNCMSKLITRSDDTEAVVKERLRIYHEMTQPVEEFYRSRGKLLEFNLPGGIPESWPKLLQVLNLDDCEDKRSAAA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00778 283 PANTHER NUCLEOTIDE KINASE 47 268 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 Gene3D - 42 276 IPR027417 -
Spst7g00778 283 Pfam Adenylate kinase 56 248 - -
Spst7g00778 283 ProSitePatterns Adenylate kinase signature. 133 144 IPR033690 -
Spst7g00778 283 NCBIfam adenylate kinase 52 270 IPR006259 GO:0004017|GO:0005524|GO:0016776
Spst7g00778 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 270 IPR027417 -
Spst7g00778 283 CDD ADK 52 254 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 Hamap Adenylate kinase [adk]. 51 271 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 PRINTS Adenylate kinase signature 54 67 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 PRINTS Adenylate kinase signature 218 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 PRINTS Adenylate kinase signature 235 249 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 PRINTS Adenylate kinase signature 82 96 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst7g00778 283 PRINTS Adenylate kinase signature 133 149 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00778 Spst-Chr7 8094898 8097891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00778 K00939 - gmx:100777619 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00778 7 8094898 8097891 Spst7g00778 7 8094898 8097891 ECH
Spst1g02951 1 38088721 38090424 Spst7g00778 7 8094898 8097891 PCT