Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00726 ATGGTGGGTATCTTTTCGTTGGTAACAGGGAGGCCTGGACCTAGTGGATTCGGATCGGCCTCCACTGCTGAACAGGTTACTCAAGGGATTGATGCCAGCAACCTCACTGCAATCATCACAGGAGGAGCAAGTGGGATAGGGTTGGAGACAGCACGTGTCTTGGCTCTTCGAAAGGCCCATGTCATTATTGCTGCAAGGAACATGGAGTCTGCAAAGGAAGCCAAACAACTCATACTGCAGGAGAACGAGTCAGCTCGTGTGGACATATTGAAGCTCGACCTGTGCTCAGTGAACTCTGTCAGAACATTTGTGGACAGCTTCATCGCCCTTGCTCTTCCTCTCAACATATTAATAAACAATGCTGGGGTCATGTTCTGCCCTTACCAGAAAACAGAAGATGGGATTGAGACGCAGTTTGCAACAAATCATCTTGGTCATTTCCTATTGACGAACCTTCTTCTTGACAAGATGAAACAAACTGCAAAAGACACTGGAATTGAGGGCAGGATCATAAATCTGTCATCAATTGCTCATGTCTACACTTACGAAGAAGGGATTCGCTTTGATAACATCAATGATGAAGATGGATACTCTGACAAGAAGGCCTACGGGCAGTCCAAGTTAGCCAACATATTGCATGCATTAGAGCTTTCTCGTCGCTTGCAGGAAGAGGGTGTTAACATCACGGCCAACTCTGTGCACCCAGGAGTGATAATGACTCCTCTCATGAGACACTCTTCATTACTTATGAATTTTCTGAAGATGTTTACCTTCTTCATATGGAAGAACATTCCGCAGGGAGCAGCCACAACGTGCTTTGTTGCTCTACACCCAAGCTTGAAAGGGGTATCTGGGAAGTACTTTCTGGATTGTAATACGTATCAACCAAGTGCACATGCCTCCAACGAACTCTTGGGAAGGAAACTTTGGGATTTCAGCAACAAATTGATCAATTCACTTTCAAAAGCCTAA 972 0.4537 MVGIFSLVTGRPGPSGFGSASTAEQVTQGIDASNLTAIITGGASGIGLETARVLALRKAHVIIAARNMESAKEAKQLILQENESARVDILKLDLCSVNSVRTFVDSFIALALPLNILINNAGVMFCPYQKTEDGIETQFATNHLGHFLLTNLLLDKMKQTAKDTGIEGRIINLSSIAHVYTYEEGIRFDNINDEDGYSDKKAYGQSKLANILHALELSRRLQEEGVNITANSVHPGVIMTPLMRHSSLLMNFLKMFTFFIWKNIPQGAATTCFVALHPSLKGVSGKYFLDCNTYQPSAHASNELLGRKLWDFSNKLINSLSKA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00726 323 Pfam short chain dehydrogenase 36 183 IPR002347 -
Spst7g00726 323 PANTHER RETINOL DEHYDROGENASE 14 317 - -
Spst7g00726 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 296 IPR036291 -
Spst7g00726 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Spst7g00726 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Spst7g00726 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Spst7g00726 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Spst7g00726 323 CDD retinol-DH_like_SDR_c_like 36 310 - -
Spst7g00726 323 Gene3D - 25 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00726 Spst-Chr7 7347299 7351196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00726 35 242 Miscellaneous Gene Families AT2G29340 28.436 1.33e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00726 - K11153 gmx:100807056 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00726 7 7347299 7351196 Spst7g00726 7 7347299 7351196 ECH
Spst1g02997 1 38534692 38538792 Spst7g00726 7 7347299 7351196 PCT