Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00131 ATGACGCTTGGTTCAGGAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAACGAGGAGAAAAAGGTATTGGAGACGGTACAGTTAGCTATGGCATGGATGATGGTGACGACATTTACATGCGCTCTTGGACTGGCACCATAATTGGCCCCCATAATACTGTACATGAAGGAAGAATCTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAACATGACCTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAGTTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGATATACTGACCCAGCTGAAGAAGGAAATGGCAGCTCCGCATAACCGGAAGCTTGTTCAGCCCCCAGAAGGGGGTCTGTTTGATTAA 444 0.4617 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGGLFD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00131 147 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 4 146 - -
Spst7g00131 147 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 147 IPR000608 -
Spst7g00131 147 SMART ubc_7 16 147 - -
Spst7g00131 147 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 46 134 - -
Spst7g00131 147 Gene3D Ubiquitin Conjugating Enzyme 4 147 IPR016135 -
Spst7g00131 147 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Spst7g00131 147 SUPERFAMILY UBC-like 11 146 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00131 Spst-Chr7 992133 995142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00131 K10704 - gmx:100816570 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00131 7 992133 995142 Spst7g00131 7 992133 995142 ECH
Spst1g02692 1 35370633 35374353 Spst7g00131 7 992133 995142 PCT