Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02240 ATGGTGGAGCTCAAGCAGAGGATCCTCACTTCTCTCTCCAAGCTCTCAGACCGCGACACGCACCAGATCGCGGTGGAGGACCTCGAGAAGACCATCGCCGCGCTCTCGCCTGACGCCATTCCCATGATCCTCAACTGCCTTTACGACGCCGCCACCGACCCCAAGCCCGCCGTCAAGCGCGATGCACTCCGCCTCCTCGCCGCCGTCTGCGCTGCTCACGGCGACGCTGCGGCCGCGCACCTTACCAAGATCATCGCGCACGTCGTCCGCCGCCTCAAGGACGCGGACTCCGCTGTCCGCGACGCCTGCCGTGACACTGTCGGCGCGCTCGCTGCGCAGTATTTGAAGGGCGACGGCGGCGGAGGGGGGGTTGGGACGGTGGTGGGGCTGTTCGTGAAGCCGTTGTTTGAGGCCATGGGGGAGCAGAACAAGGGGGTGCAGGCGGGCGCGGCGGTGTGCATGACCAAGATGGTTGAGTGTGCTGGCGGCGGAGGGGAGGCGCCGGTGCCGGCGTTCCAGAAACTGTGTCCGAGGATCTGTAAGCTGCTCAGCAGTCCCAATTTCATGGCTAAGGCGGCGATTTTGCCGGTGGTTGCCAGCTTGTCACAGGTTGGAGCGATTGCACCACAAAGCTTGGAACATTTGCTGCCTAGCATCCATGAATGCCTTTCTAGTACGGATTGGGCAACACGTAAAGCAGCAGCTGAGACATTAAGTTCTTTGGCATTGCATTCAAGCAGTTTGGTTACTGATAGAGTGGCACCCACATTGGCAGTACTTGAGGCTTGCCGATTTGACAAGATAAAACCTGTAAGAGATAGCATCAATGAGGCATTGCAATTGTGGAAAAAGATTGCAGGAAAAGGAGATGGATCTCCTGATGATTCAAAGCCCTCGTCTGATGGTGGCAATGAATCAACTATTTCATCAGAAACAATTGACCTGAAAAAAGTAAATCTCGGTGAGAGGAAGACTGATTCATCAATAAAAGATTCATCAACTAGTTCTTCAAATATGGATTCAACTTCTAAGGCAAAAGCAGCTGGCATATCAGAGAAAGCAGTTGTAATACTTAAGAAAAAAGCACCAGCATTATCTGATAAAGAATTAAATCCGGAATTTTTCCAAAAGCTTGAAAGAAGGGGTTCTGATGATTTACCAGTGGAAGTTGTTGTTCCCCGTAGAGGCCTCAATTCTTCTAACTCCAACAATGAGGAAGAATCAGAGGTAAATGTTAAGGATTCGAAAGAAAGAATGAGTTCTGTTGGAAACATCCCTAACGATGATTTTCATGGATCCTCTAGTAATAAATATCGAATCTCTGAACGAGGCAATGATGGAAATTCCAAACAAAGGAATTATGATGATTTTGGCCATGATAGACACTTTGAAAGGAGAGTGAACTCAAAAGAACTGAGGACTAAGGCATATGATACCGATGACAGGACTGAAAATGATCAAAGGGAGAGTTCTGCCAATCTTGCAGGTTTTTCTAAAACTGATGGTCAATCAGAAGTACCCTTCTCCAATAACAGAGGAAACTGGTTGGCCATCCAGAGGCAGTTGCTGCAACTGGAAAGGCAACAAGTTCATCTTATGAATATGCTTCAGGATTTCATGGGTGGATCTCATGATAGTATGGTGACTCTTGAGAACAGAGTGCGAGGTCTTGAGAGAATTGTTGAAGACATGTCACGAGATTTATCCATATCATCAGGTCGCAGAAACTTCACAGGGTTTGAAGGATCATCTAGCAGGCCATCTAACAAGTATAATGGTTTTAATGACTTCTCCAGTTCCAAGTATGGAAGAGGTGGTGATGGACGCATCCAAATTGGTGAAAGATTTTCCCAATCTGATGGAAATACCCTGGGAATGAGGGGAAGAGGGCCATCTTGGAGATCTGACGTGTCCGAGGGGTGGGATCTTCCTGGGTATGGTGCTTCTAGAAATAATAGCCAGGTTTCCTCAAGGAGGGCTTTTGGTGGTAGTTCTGCTGATGGAAGATCGCCAAAATCTGTGCATGAGAGTGATCAAGCAGGCAACAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGACCCTCCGCTAGAAGTGTCTGGCAAGCTTCTAAGGATGAAGCTACCTTGGAAGCAATTCGAGTTGCTGGTGAGGACAATGGAGCATCTAGGGCAACAAGGGTAGCCATCCCTGAAATGACTGCAGAAGCTCTGGCCGATGACAACATTGGGCAAGAGAGGGATGCCATCTGGACTTCTTGGACCAATGCAATGGATGCCCTTCAAGTAGGTGACATAGATTCAGCCTTTGCAGAAGTATTGTCCACGGGTGATGATATTTTGCTTGTAAAGATAATGGATAGAACAGGCCCTGTAATTGACCAGCTTTCAAGTGAAGTTGCTTGTGAAATTGTGAATGCCATTGGACAATTCCTTCTTGACCAGAACATGTATGACATCTGTTTGTCTTGGATTCAACAGTTGCTGGAGATAGTATTGGACAATGGCCCTGAAACCTTTGGCATCCCTATGGAAGTGAAGAAAGAGCTCTTACTGAATTTACATGAAGCTTCTACCGATACAACTGAGGCCTGGGAAGGGGTACAGCCAGATCAACTTTTATTGCAATTGGCTTCAGCCTGGGAAATTGATCTACAACAGCATGACAAATAG 2685 0.4816 MVELKQRILTSLSKLSDRDTHQIAVEDLEKTIAALSPDAIPMILNCLYDAATDPKPAVKRDALRLLAAVCAAHGDAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKGDGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMTKMVECAGGGGEAPVPAFQKLCPRICKLLSSPNFMAKAAILPVVASLSQVGAIAPQSLEHLLPSIHECLSSTDWATRKAAAETLSSLALHSSSLVTDRVAPTLAVLEACRFDKIKPVRDSINEALQLWKKIAGKGDGSPDDSKPSSDGGNESTISSETIDLKKVNLGERKTDSSIKDSSTSSSNMDSTSKAKAAGISEKAVVILKKKAPALSDKELNPEFFQKLERRGSDDLPVEVVVPRRGLNSSNSNNEEESEVNVKDSKERMSSVGNIPNDDFHGSSSNKYRISERGNDGNSKQRNYDDFGHDRHFERRVNSKELRTKAYDTDDRTENDQRESSANLAGFSKTDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRNFTGFEGSSSRPSNKYNGFNDFSSSKYGRGGDGRIQIGERFSQSDGNTLGMRGRGPSWRSDVSEGWDLPGYGASRNNSQVSSRRAFGGSSADGRSPKSVHESDQAGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGASRATRVAIPEMTAEALADDNIGQERDAIWTSWTNAMDALQVGDIDSAFAEVLSTGDDILLVKIMDRTGPVIDQLSSEVACEIVNAIGQFLLDQNMYDICLSWIQQLLEIVLDNGPETFGIPMEVKKELLLNLHEASTDTTEAWEGVQPDQLLLQLASAWEIDLQQHDK 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02240 894 SUPERFAMILY ARM repeat 10 821 IPR016024 -
Spst6g02240 894 MobiDBLite consensus disorder prediction 417 442 - -
Spst6g02240 894 MobiDBLite consensus disorder prediction 602 684 - -
Spst6g02240 894 MobiDBLite consensus disorder prediction 443 488 - -
Spst6g02240 894 MobiDBLite consensus disorder prediction 647 663 - -
Spst6g02240 894 MobiDBLite consensus disorder prediction 297 314 - -
Spst6g02240 894 MobiDBLite consensus disorder prediction 330 345 - -
Spst6g02240 894 FunFam Microtubule-associated protein TORTIFOLIA1 118 277 - -
Spst6g02240 894 FunFam Microtubule-associated protein TORTIFOLIA1 1 117 - -
Spst6g02240 894 SMART TOG_3 33 274 IPR034085 -
Spst6g02240 894 MobiDBLite consensus disorder prediction 489 508 - -
Spst6g02240 894 MobiDBLite consensus disorder prediction 389 508 - -
Spst6g02240 894 Gene3D - 3 115 IPR011989 -
Spst6g02240 894 MobiDBLite consensus disorder prediction 286 346 - -
Spst6g02240 894 Coils Coil 547 567 - -
Spst6g02240 894 Gene3D - 116 279 IPR011989 -
Spst6g02240 894 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 1 862 IPR033337 GO:0005874|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02240 Spst-Chr6 31155055 31160969 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02240 - - gmx:100804845 1540.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02240 6 31155055 31160969 Spst6g02240 6 31155055 31160969 ECH