Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02233 ATGGCTTCTATCTCATGCATCACCCACCACCCCATCACTTCGAAGCTCAACAATGTCTTCCCTTCACCTCACGTTTCTGCCTCAAACTTGGCCTCACGGTTTCTGGGCATAAAAAAAAGCGTTGGGTGGCTCAGCCTAACCTGTAGATTTGGCCCCTCCAACGGCTCCAAAACCACATGCTGGTTCAAGTTCGGCAAGAACGGTGTTGATGCCGAAGGTGCTGGCATTTATGGCAGCCAGGGTCGTGATGACTTTGACAGAGATGATGTTGAACAGTACTTCAACTACATGGGGATGCTGGCTGTAGATGGAACCTATGACAAAATGGAAGCTCTTCTAAACCTGAAAATACACCCTGTGGACATTCTTCTCCTGTTAGCTGCATCAGAAGGTGACAAGCCAAAAATTGAAGAACTGTTGAGAGCTGGAGCAAAATATGATGTGAAAGATGGAGATGGTAGGACGGCACTGGATAGGGCCAATGAAGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAAAGGGCATGA 531 0.4614 MASISCITHHPITSKLNNVFPSPHVSASNLASRFLGIKKSVGWLSLTCRFGPSNGSKTTCWFKFGKNGVDAEGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVDGTYDKMEALLNLKIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDGDGRTALDRANEEIKDFILNFSVQRA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02233 176 Gene3D - 105 175 IPR036770 -
Spst6g02233 176 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 176 IPR044242 GO:0006886|GO:0009570|GO:0090391
Spst6g02233 176 SUPERFAMILY Ankyrin repeat 99 169 IPR036770 -
Spst6g02233 176 FunFam Protein LHCP TRANSLOCATION DEFECT 84 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02233 - - gmx:100499940 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02233 6 31003019 31004371 Spst6g02233 6 31003019 31004371 ECH