Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02087 ATGGCCGTTGACAGCGACAGTGACTTGGCGCAAATTACCAAACAACAGTTAAAATTGGGAACAGCTAGCTCAAGCCAGAATCAACAACAAAATAATGGAACAGAATTTGCAGCAAAAGATGAGGAGAAGGAAACAAGATTTGTGACAGTGGCGAAAGCTGGCATAGTCGACCTTGTGAATGAGCTTCAAAACAGAGCAAAAGAAGAGGAAATGGAGTCTGCATATTTGACAGCAGCAAGAAACGGCATTACGGAAATTGTGCATGCACTTCATTTTAAAATACCAAGTGTCGTACATGAAACTAACTCTAAAAATCAAAATGTATTGCTTGTGGCAGCGAAGAATAAGCAAGTAAATGTTGTTCAGTTGTTGCGGAAGAATCTTGAAAAGAACGTCTTTCGTAGCTTAATTTCAGAAATGGATAACAGAGAAAACACAGTGCTACACTTAGCTGCAGGTGCATCGAGCAACGAAACGACTTGGAAGTCACTTGCTACTGTGATGCAAATGATGTGGGATATCAAGTGGTATCAGTACATCAGTGATCTTGTGCCGGAAGAATTCATTTATATACGCAACAAAGATTACAAGACTGCATGGGAAATCTATGAGGCGAAACACAAGGATAAAGCGAAAGAGTGCTCAGAGAACCTAAAGGACTTATCCAATTCTGGCTCAGTTGTGGCGGCTCTCATCGCCGGCGTTTCCTTCGCAACGTCGAGCACCGTTCCCGGGGGCACCGACAAGGGAAAACCTATCTTCGGTGGCCATCCTGCATTTAATGTATTTGCCACTGCTTCCCTGATTGGACTTGTCTTCTCCATCACTGCACTTGTAATGTTCCTCGCCATACTAACTTCTTCAAAACAGGCCCAAGACTTCCGCTTTAGCTTGCCATTGAAGCTTAGTTTCGGCTTAAGTTCTCTTTTTGCATCCGTTGTTGCAATGCTTGTTTCTTTTGGGGCTGCACAGTCCTTTGTGCTTGAAGAAAAGTCCAAGATAATACTCCTCCCTGTTTATGCTACCACTTTGTTGCCTTTGGCTCTCTATGAAGTGCTGCACCTTTCATTCTGGTTTGATCTTCTTAGATTTGTTTCCAAGAAGGAGCCATGGACATTGTAG 1122 0.4305 MAVDSDSDLAQITKQQLKLGTASSSQNQQQNNGTEFAAKDEEKETRFVTVAKAGIVDLVNELQNRAKEEEMESAYLTAARNGITEIVHALHFKIPSVVHETNSKNQNVLLVAAKNKQVNVVQLLRKNLEKNVFRSLISEMDNRENTVLHLAAGASSNETTWKSLATVMQMMWDIKWYQYISDLVPEEFIYIRNKDYKTAWEIYEAKHKDKAKECSENLKDLSNSGSVVAALIAGVSFATSSTVPGGTDKGKPIFGGHPAFNVFATASLIGLVFSITALVMFLAILTSSKQAQDFRFSLPLKLSFGLSSLFASVVAMLVSFGAAQSFVLEEKSKIILLPVYATTLLPLALYEVLHLSFWFDLLRFVSKKEPWTL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02087 373 Gene3D - 13 213 IPR036770 -
Spst6g02087 373 SUPERFAMILY Ankyrin repeat 31 158 IPR036770 -
Spst6g02087 373 Coils Coil 52 79 - -
Spst6g02087 373 Pfam Domain of unknown function 216 326 IPR026961 -
Spst6g02087 373 MobiDBLite consensus disorder prediction 14 35 - -
Spst6g02087 373 MobiDBLite consensus disorder prediction 14 40 - -
Spst6g02087 373 PANTHER CASKIN 45 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02087 Spst-Chr6 21713550 21715048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02087 45 320 Miscellaneous Gene Families AT3G12360 24.398 9.90e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02087 - - pvu:PHAVU_005G119900g 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02087 6 21713550 21715048 Spst6g02087 6 21713550 21715048 ECH