Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02085 GTTGCATATCAAGTAGAGAGTGACTGCCACAAATTCAGAATCAATGAGGGAAGAGACACTGCACTACATGTGGCAGTGAATGATGGGAAGGTGAGGCTTGTTAAGGCTCTTGTTGGAGCAATCTTGAGCCATGAAGGGAGGGGAGAGTTGAGGAGTGATAGTGCACTGAGATTAACCAATGAGAGAGGGGACACTCCTTTGCACCTTGCTGCCTCAAGAGGGTTCATTCGCATGTGTAAGTGCATTATTGGGGAAAATAAGGAAAGGAATGAATTGATTAAGGCTAGGAACAAGAAGGGTGAAACACCTCTTTTTAGGGCTGTGCATGCAGGCGAAACAGAGACCTTTGTGTACCTTAACAATGTTTCCAAAGAGTTAGATGTTACTCTTAGGAACTATCACGGGGATACCATCCTTCACCAAGCCATTTGGAGAGAATTCTTGGATTTGGCAATTTTAATAATTCATTGTTATCCCGAACTTGAGAACGCAACAAACGAAGTTGGAATGACACCTCTAAAAATTCTTGCCAACAAACCTTCAGCATTCAAGAGTGGAAGCAATCTCTCACGGTTGGAGACAATTCTATCCTATTGTATATTTGTCGGATCTCTCGATGCTGACAAAGCTATAAAATCGTACATGGAGAAAGTTAAAAAATATGACGCCCCTGAACTCCGAGAAAATGAAGCCAATATAGGATCGAATTATGAGGAAGGAAAACATGCCACTTCTAGTGCTGGGTTTGTAAAGAGTGCAGTTCGATCAGCATTCAATTTCCTTTGCCTCGGTGTCACTGCACCAGACTTGAAAGCAATAAAGTCGACAAGGCAGAAGCACACATGGGCTATTCAGCTCTTGCATATTTTTATGAAAACTCCTTTTGAGTCGTATACTGGGGGTCAACCATTCATGGACGTTGACGGCGACAGTGTGCCACACGATGTTACCAAACAACAGATAGAACTGGAAAAACAGATACAACAGAATCAACAACAGAATCAACAACAAAAGAATACAAAAGAATCTGCAGCAAAAAATCAGGAGGAGGAAACACCATTTGTGACAGTGGCAAAAGCAGGCATAGTCGACTTTGTGAAAGAGCTTCAAAACAATGAACCAAGTGCCCTCCATGACTCTACCACCCCTGAGAATGATAACCTGCTGGTTGTGGCAATGAAGATCAAGTACAAATTTCGGGAACACCATGTTGACAAGAAGGAGACTGCATTATTGGCAGCTGCAAGAAACGGCATTGAGGAGATTGTGCGTGACCTTCTATTGAAAATACCGAATGCTGTGCATGAAACCAACTCCAACAATGAAAACGTCTTGCTTGTGGCAGTGAAGAACAGGCAAACCAAAGTTGTTGAGAAGTTGAAGAAGATTGTGGAAAAGAATCTGTTTGGTAGCTTAATTTTGGGAGTGGATAACAGCGAGAACACCGTCTTGCATTTGGCTGCAGGTTCAACTAGCAACAATGTAAGGACATGGCAGATTGCTGGTGCTGCCATGCAAATGATGTGGGATATCAAGTGGTATCAGTACGTGAGAACCCTAGTGCCAGAACATTTAACTTTCAGAACCAACAACGACGGAAAAACCGCCGGGGAAATCTTCAAGCAGAATCACAGAGATCTGGTGAATGAGAGCTCCGACTGGATGAAGGAAACTTCTAATTCCTGCTCCGTGGTGGCCGCTCTCATCGCCGGTGTCTCGTTCGCCACCTCCAGCACCGTCCCGGGCGGCACCGACAACGGAAAGCCAGAGCTGGAAGGGGAGCCGGCCTTCGACGCCTTCGCCATCGCCTCCCTGATCGGCCTCTGCTTCTCCGTCACCGCCCTTATAATGTTCCTGGCCATCCTGACCTCCCGGAAACAGGCGCAGGACTTCCAGAAGAGCTTGCCCTTGAAGCTCCTCTTAGGCCTCAGCTCTCTCTTTGTCTCCATTGCCTCCCTGCTCACTTCGTTTTGCTTTGCGCATTTCTTCTTGTTCAAGAAGAAGTACAAGAACATCTTGTTCCCTGTTTACGTTGCCACCTGTTTGCCTATCACTTTCTATGCAATTGTGCAGTTTCCTCTCTACATTGATCTGCTTAAAGTCATCTTGAAGAAGCTGCCACAACCAAGCATTACCAGCAGCGAATTCTAG 2151 0.4547 VAYQVESDCHKFRINEGRDTALHVAVNDGKVRLVKALVGAILSHEGRGELRSDSALRLTNERGDTPLHLAASRGFIRMCKCIIGENKERNELIKARNKKGETPLFRAVHAGETETFVYLNNVSKELDVTLRNYHGDTILHQAIWREFLDLAILIIHCYPELENATNEVGMTPLKILANKPSAFKSGSNLSRLETILSYCIFVGSLDADKAIKSYMEKVKKYDAPELRENEANIGSNYEEGKHATSSAGFVKSAVRSAFNFLCLGVTAPDLKAIKSTRQKHTWAIQLLHIFMKTPFESYTGGQPFMDVDGDSVPHDVTKQQIELEKQIQQNQQQNQQQKNTKESAAKNQEEETPFVTVAKAGIVDFVKELQNNEPSALHDSTTPENDNLLVVAMKIKYKFREHHVDKKETALLAAARNGIEEIVRDLLLKIPNAVHETNSNNENVLLVAVKNRQTKVVEKLKKIVEKNLFGSLILGVDNSENTVLHLAAGSTSNNVRTWQIAGAAMQMMWDIKWYQYVRTLVPEHLTFRTNNDGKTAGEIFKQNHRDLVNESSDWMKETSNSCSVVAALIAGVSFATSSTVPGGTDNGKPELEGEPAFDAFAIASLIGLCFSVTALIMFLAILTSRKQAQDFQKSLPLKLLLGLSSLFVSIASLLTSFCFAHFFLFKKKYKNILFPVYVATCLPITFYAIVQFPLYIDLLKVILKKLPQPSITSSEF 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02085 716 SMART ANK_2a 62 91 IPR002110 GO:0005515
Spst6g02085 716 SMART ANK_2a 17 46 IPR002110 GO:0005515
Spst6g02085 716 SMART ANK_2a 99 128 IPR002110 GO:0005515
Spst6g02085 716 SMART ANK_2a 406 436 IPR002110 GO:0005515
Spst6g02085 716 SMART ANK_2a 134 163 IPR002110 GO:0005515
Spst6g02085 716 SMART ANK_2a 440 468 IPR002110 GO:0005515
Spst6g02085 716 MobiDBLite consensus disorder prediction 327 342 - -
Spst6g02085 716 Coils Coil 316 351 - -
Spst6g02085 716 PANTHER CASKIN 15 701 - -
Spst6g02085 716 Pfam Ankyrin repeats (many copies) 19 81 IPR002110 GO:0005515
Spst6g02085 716 Gene3D - 319 570 IPR036770 -
Spst6g02085 716 Gene3D - 4 208 IPR036770 -
Spst6g02085 716 SUPERFAMILY Ankyrin repeat 20 489 IPR036770 -
Spst6g02085 716 MobiDBLite consensus disorder prediction 327 351 - -
Spst6g02085 716 Pfam Domain of unknown function 553 662 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02085 Spst-Chr6 21659561 21665132 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02085 352 657 Miscellaneous Gene Families AT3G12360 24.398 4.70e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02085 - - gmx:100813041 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02085 6 21659561 21665132 Spst6g02085 6 21659561 21665132 ECH