Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02056 ATGGAACTGAAACTACTTCTAACGATTTTATTGATTCAGTCTGCAACTGCCGCTGCTGATTACATTCGACCTCTGCCTCGAAAAGCCTTGCATCTTCCATGGCATTCTAAACCCTCCTCTTACCCTCAACAGGTACACATTTCTTTAGCAGGAGACCAGCACATGAGAGTTACTTGGATTACTGATGATAATTCTGCACCTTCAATTGTAGAATATGGAACATCTGCAGGGCGATATGACTCTGTAGCTGAAGGAGAGACCACTTCTTACAGTTATATGTTCTATAGCTCTGGAAAGATACACCATATCGTTATTGGGCCTTTAGAGCATAATTCTGTGTACTATTATCGATGTGGTGGACTAGGTCCTGAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATTATTTTTGCTGTGGCTGGGGATTTGGGTCAAACTGGATGGACTAAATCAACACTGGATCACATTGACCAATGTAAATATGATGTTCACCTACTTCCGGGAGACCTTGCATATGCTGATTATATCCAGCATCGCTGGGACACGTTTGGTAGGTTAGTGCAGCCACTTGCTAGTGCAAGACCATGGATGGTAACACAAGGGAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAAATTCAAATCTCTTTTATTCATTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGCTCCTATGCAGATTATGATGAGTACTCTGAACAATATAGATGGCTTAAGGAAGATCTTTCAAAGGTGGACAGGAAAAGCACACCTTGGTTGCTTGTGTTATTTCATGTGCCATGGTATAATAGTAACACGGCTCATCAAGGTGAAGGGGCTGATATGATGGCAGCAATGGAGCCATTGCTTAATGCTGCTAGCGTCGATTTAGTTATCGCTGGTCATGTGCATGCTTATGAACGTTCGAAACGTGTATACAATGGAAGACTTGACCCTTGTGGTTCAGTCCATATAACCATTGGTGATGGAGGAAACAAAGAAGGCTTAGCTCCAAAATATATAAATCCGAAGCCAGTATGGTCAGAGTTCCGTGAAGCCAGTTTTGGTCATGGCGAGCTAAAGATTGTAAACTCTACGCATGCTTTCTGGAGTTGGCACAGAAATGACGATGATGAGCCAGTAAAATCCGATGATGTCTGGATAACCTCTTTAACCAGCTCAGGATGTGTTGATCAAAAGAGAAACGAACTCGGGAATAAACTCATAACACCTTAA 1299 0.4234 MELKLLLTILLIQSATAAADYIRPLPRKALHLPWHSKPSSYPQQVHISLAGDQHMRVTWITDDNSAPSIVEYGTSAGRYDSVAEGETTSYSYMFYSSGKIHHIVIGPLEHNSVYYYRCGGLGPEFQLRTPPAQLPIIFAVAGDLGQTGWTKSTLDHIDQCKYDVHLLPGDLAYADYIQHRWDTFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFVSYNSRWKMPFEESGSNSNLFYSFEVAGVHIIMLGSYADYDEYSEQYRWLKEDLSKVDRKSTPWLLVLFHVPWYNSNTAHQGEGADMMAAMEPLLNAASVDLVIAGHVHAYERSKRVYNGRLDPCGSVHITIGDGGNKEGLAPKYINPKPVWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDVWITSLTSSGCVDQKRNELGNKLITP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02056 432 CDD MPP_PAPs 135 411 IPR041792 -
Spst6g02056 432 SUPERFAMILY Metallo-dependent phosphatases 135 402 IPR029052 -
Spst6g02056 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 29 131 IPR008963 GO:0003993|GO:0046872
Spst6g02056 432 Pfam Calcineurin-like phosphoesterase 138 327 IPR004843 GO:0016787
Spst6g02056 432 Gene3D - 133 420 IPR029052 -
Spst6g02056 432 Gene3D - 41 132 - -
Spst6g02056 432 Pfam Iron/zinc purple acid phosphatase-like protein C 344 399 IPR025733 -
Spst6g02056 432 PANTHER ACID PHOSPHATASE RELATED 8 413 IPR039331 GO:0003993
Spst6g02056 432 Pfam Purple acid Phosphatase, N-terminal domain 42 120 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02056 Spst-Chr6 20997545 21001356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02056 42 422 Miscellaneous Gene Families AT1G13900 25.330 3.12e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02056 K22390 - gmx:100782338 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02056 6 20997545 21001356 Spst6g02056 6 20997545 21001356 ECH
Spst6g02056 6 20997545 21001356 Spst8g00852 8 7628975 7631513 PCT