Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02047 ATGGAGAGTTTCCTGAGCTCAAGTTCTGAGAAGAGGGTGGTAGATACTCCAAAGGTTTCAATAAAAGATGAATCTGAACGAAGGCCTAAGATGGGTGTTTATGTTGACGATGATGGGTGGGTTCCTGTGATCATATCTTGGATCAGAATTGTGACTTGTTTTGTGTCTATGATGATCACAACATTCATCTGGGCATTGATCATGTTTGTGCTTATACCATGGCCCTATGAGAGGATTAGGCAAGGAAACATTTATGGACATGTGACTGGCAGAATGCTGATGTGGATTCTTGGGAATCCTATAAAAATTGAAGGTGCCGAGTACTCCAACAAGAGGGCCATTTACATCAGCAATCATGCATCTCCAATTGACATATTTCTGATAATGTGGTTGACTCCTACAGGTACTGTCGGCATTGCAAAGAAAGAGATCATATGGTATCCTCTATTTGGCCAACTGTATGTTTTGGCCAATCATCTTCGTATAGATCGGTCCAATCCAATGGCAGCTATTGAGTCCATGAAAAAGGCAGCTCATGCAGTTGTGAAGAACAATCTGTCACTGATCATTTTTCCAGAGGGCACAAGGTCTAAAAATGGACGACTTCTACCTTTCAAAAAAGGTTTTGTTCATTTGGCTCTGCAATCTGGTCTTCCAATTGTTCCAATGGTCCTGACAGGTACTCATCTGGCATGGAGAAAAGGAAGCTTACATGTCAGACCAGCACCACTTACTGTCAAGTATCTTCCTCCTATAAGCACTGAAAATTGGACAGTTAGCAAGATTGATGACTATGTTAAAATGTTACATAACTTGTATGCAGAAAACCTTCCCAAGTCTCAAAGACCCTCTACCTTGGAAGACTGA 867 0.4141 MESFLSSSSEKRVVDTPKVSIKDESERRPKMGVYVDDDGWVPVIISWIRIVTCFVSMMITTFIWALIMFVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYSNKRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNPMAAIESMKKAAHAVVKNNLSLIIFPEGTRSKNGRLLPFKKGFVHLALQSGLPIVPMVLTGTHLAWRKGSLHVRPAPLTVKYLPPISTENWTVSKIDDYVKMLHNLYAENLPKSQRPSTLED 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02047 288 SMART plsc_2 113 228 IPR002123 GO:0016746
Spst6g02047 288 Pfam Acyltransferase 101 225 IPR002123 GO:0016746
Spst6g02047 288 CDD LPLAT_AGPAT-like 91 263 - -
Spst6g02047 288 NCBIfam 1-acylglycerol-3-phosphate O-acyltransferase 109 225 IPR004552 GO:0003841|GO:0008654|GO:0016020
Spst6g02047 288 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 47 282 - -
Spst6g02047 288 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 43 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02047 Spst-Chr6 20676362 20679006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02047 50 228 Acyl Lipid Metabolism Gene Families AT4G30580 32.804 4.80e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02047 - - pcin:129318885 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02047 6 20676362 20679006 Spst6g02047 6 20676362 20679006 ECH