Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02046 ATGCCTCTTGATTCTACCATCCGTAAGGTTTCTGGGCTGGTTTCGTGGATACAGATGAGTGTGGTGGGGTTTGACATTGGTAACGAGAACTGTGTCATTGCTGTAGTTAGGCAACGTGGGATTGATGTTTTGTTGAATTATGAATCAAAACGCGAAACCCCAGCTGTTGTCTGCTTCAGCGAGAAGCAGCGGCTTTTGGGTTCTGCTGGTGCTGCTTCTGCTATGATGCACATCAAGTCCACAATATCTCAAATAAAGAGACTGATAGGAAGGAAATTCGCAGATCCTGATGTGGATAAAGAGCTGAAAATGCTCCCTCTTGAAACTTCTGAGGGTCCAGATGGAGGCATTTTAATTCACTTGAAGTACTTGGGGGAGATCCATGTATTTACACCAGTTCAAATATTGTCCATGGTGTTTGCTCATTTGAAGACTATGACCGAAAAAGATTTGGAGATGCCCATTTCGGATTGTGTTATTGGGATCCCATCATACTTCACGGACTTGCAGAGACGGGCATATCTTGATGCAGCGAAAATTGCTGGGTTGAAGCCTCTTAGATTTATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATGTATAAAACAGATTTTAGCAGTACAGGTCCTGTTTATGTTGCATTTATTGACATTGGTCACTGTGATACTCAGGTCTCTATTGCATCATTTGAGTTTGGGAAAATGAAGATACTTTCACACGCATCTGACAGGAGCTTAGGGGGGAGGGACTTTGATGAGGTTCTTTTTAGTCATTTTGCAGCAAAATTCAAGGAGGAGTACAATATTGATGTGTATTCTAATACCAAGGCATGCTTTAGGCTACGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTGGAGGCGCCTCTAAATATCGAGTGCTTGATGGATGAGAAAGATGTTAAGGGCTTTATCTCAAGGGAAGAATTTGAGAATCTGGCATCAGGATTATTAGAGAGACTTTCTATTCCTTGCCACAGAGCATTAACTGATGCAAAGTTGACAGTGGAGAAGATTTCTTCTGTAGAGCTAGTCGGTTCTGGTTCTAGGATTCCAGCTATAAGTACATTACTAATTTCTTTATTCAAGAGAGAACCCAGTAGGCAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCCGTTTATCGTGTGAGAGAATATGAGGTTGAGGATGTTATTCCCTTTTCAGTTGGACTTTCATCAGATGAAGGTCCAATTGCTGTGAGATCAAATGGTGTACTTTTCCCAAGAGGCCAACCTTTTCCAAGTGTCAAAGTTATAACCTTTCAGCGAAGTAATTTGTTTCATTTGGAAGCTTTCTATGTTAATCCAGATGAACTACCACCTGGGACATCTCCTAAAATTAGTTGTGTTACGATTGGCCCTTTCCATGTATCCCATGGTAGTAAGAGCAGAGTTAAAATTAGAGTTTCACTTGATATACATGGAATTGTCAGTATTGAATCAGCTACAATGATCAAGGATGACATGGATGATTCAGTTATGGTGGGTGAATATAATTCAAATTCTGGTTCAATGGATATTGATCCCATTCCTGAGACAGTTGCCAATGGGTTTAATGATATTACCAATAAGAAGTTCGAATCTCCATGTAGTTCTGCTGATGGTACAAGGAAAAATAAGGCTAACAGAAGGCTTGATGTTCCTGTGAATGAGAATATCTATGGTGGAATGACAAAGGCAGAAATCTCAGAAGCTCGTGACAAAGAACTCCAGTTGGCCCAACAGGACAGAATTATAGAGCAAACCAAAGAAAAGAAGAATAGCTTGGAGTCATATGTATATGATATGAGGAATAAGCTCTTCCACACATATAGAAGCTTTGCGAGTGAACAAGAGAGGGATGACATATCTAGGAGTCTTCAAGAGACTGAGGAATGGCTTTATGAGGATGGTGTCGATGAGACTGAGCATGCTTATTCTTCAAAACTGGAAGATCTGAAAAAGCTGGTAGATCCAATTGAGAATCGGTTCAAAGATGAAAAAGAAAGAGTGCAAGCCAAAGATGATTTATCAAAGTGCATCTTAAAGCATCGTGGGTCTGCAGATTCCCTTCCACCCCAGGATAAAGAACTGATCATCAATGAGTGCAATAAAGCAGAGCAGTGGTTGAAAGAGAAGACCCAGCAACAAGAATCCTTTCCCAAGAATACTGACCCAATATTATGGTCAAGTGATATTAAGGGCAAGATAGAGGAGTTGAACTTAACATGCCAACACATATCGGGATCCAAGGCTTCTCCATCTCCAGAAGACGAAGACATGCCAGATACTTCCAATGATTCATGA 2370 0.4097 MPLDSTIRKVSGLVSWIQMSVVGFDIGNENCVIAVVRQRGIDVLLNYESKRETPAVVCFSEKQRLLGSAGAASAMMHIKSTISQIKRLIGRKFADPDVDKELKMLPLETSEGPDGGILIHLKYLGEIHVFTPVQILSMVFAHLKTMTEKDLEMPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRFIHDCTATALSYGMYKTDFSSTGPVYVAFIDIGHCDTQVSIASFEFGKMKILSHASDRSLGGRDFDEVLFSHFAAKFKEEYNIDVYSNTKACFRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGFISREEFENLASGLLERLSIPCHRALTDAKLTVEKISSVELVGSGSRIPAISTLLISLFKREPSRQLNASECVARGCALQCAMLSPVYRVREYEVEDVIPFSVGLSSDEGPIAVRSNGVLFPRGQPFPSVKVITFQRSNLFHLEAFYVNPDELPPGTSPKISCVTIGPFHVSHGSKSRVKIRVSLDIHGIVSIESATMIKDDMDDSVMVGEYNSNSGSMDIDPIPETVANGFNDITNKKFESPCSSADGTRKNKANRRLDVPVNENIYGGMTKAEISEARDKELQLAQQDRIIEQTKEKKNSLESYVYDMRNKLFHTYRSFASEQERDDISRSLQETEEWLYEDGVDETEHAYSSKLEDLKKLVDPIENRFKDEKERVQAKDDLSKCILKHRGSADSLPPQDKELIINECNKAEQWLKEKTQQQESFPKNTDPILWSSDIKGKIEELNLTCQHISGSKASPSPEDEDMPDTSNDS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02046 789 FunFam Heat shock 70 kDa protein 4 133 210 - -
Spst6g02046 789 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 403 536 IPR029047 -
Spst6g02046 789 FunFam Heat shock 70 kDa protein 16 isoform A 405 583 - -
Spst6g02046 789 Gene3D - 56 131 - -
Spst6g02046 789 Gene3D - 23 392 - -
Spst6g02046 789 CDD HSPA4_like_NDB 20 399 - -
Spst6g02046 789 FunFam Heat shock 70 kDa protein 4 19 99 - -
Spst6g02046 789 Gene3D - 204 378 - -
Spst6g02046 789 FunFam Heat shock 70 kDa protein 4 585 695 - -
Spst6g02046 789 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 587 684 IPR029048 -
Spst6g02046 789 Coils Coil 593 613 - -
Spst6g02046 789 Gene3D - 585 697 IPR029048 -
Spst6g02046 789 FunFam Heat shock 70 kDa protein 4 248 331 - -
Spst6g02046 789 MobiDBLite consensus disorder prediction 766 789 - -
Spst6g02046 789 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 402 618 IPR029047 -
Spst6g02046 789 PANTHER HSC70CB, ISOFORM G-RELATED 19 777 - -
Spst6g02046 789 SUPERFAMILY Actin-like ATPase domain 19 203 IPR043129 -
Spst6g02046 789 FunFam Heat shock 70 kDa protein 4 56 131 - -
Spst6g02046 789 Pfam Hsp70 protein 21 684 IPR013126 GO:0005524|GO:0140662
Spst6g02046 789 Gene3D Actin; Chain A, domain 4 248 331 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 20 33 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 350 366 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 158 178 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 406 425 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 381 401 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 48 60 - -
Spst6g02046 789 PRINTS 70kDa heat shock protein signature 490 506 - -
Spst6g02046 789 SUPERFAMILY Actin-like ATPase domain 210 399 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02046 Spst-Chr6 20649900 20659759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02046 20 681 Miscellaneous Gene Families AT5G28540 28.741 2.40e-77 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02046 K09489 - gmx:100783952 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02046 6 20649900 20659759 Spst6g02046 6 20649900 20659759 ECH