Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02019 ATGAGGAACAGAATTGTGATGGGAAATTACCTTCTCTTTCTCTGTTTCTTCATCTTCAGCTTAGGACTCTTGGAGGCTCAAAAGGCTCCAGCAGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGAGTTTATCCATTGAAAAGGCAATTCTTCCTCACTATGGCATTGATTTTCCAACTAAGAAACCCACTGGGAGATTTAGCAATGGCAAGAATGCTGCAGATTTAATTGCTGAAAAATTGGGCCTACCCACTTCACCACCTTATCTCTCTCTACTATCTAAAGTCCACAACAACAGCAAGAACATATCTGTTTTGGGTGGTGTTAACTTTGCCTCAGGAGGTGCTGGAATATTTAATGCCTCAGATAAAGGTTTTATGCAATCAATTCCTTTGCCAAAGCAAGTGGACTACTACTCACAAGTGCATGAAAAACTGACACAACAAATAGGAGCTTCTACTCTTGAGAAACACCTCTCAAAGTCCATCTTCATTGTGGTGATTGGTGGCAACGATATCTTTGGTTACTTTGACTCACAGGATCTTCGAAAGAAAAACACCCCTCAGCAGTATGCAGATTCCATGGCTTCCACATTAAAAGTGCAACTACAGAGATTATACAACAATGGTGCAAAGAAATTTGAGATTGCTGGTGTTGGTGCAATTGGGTGCTGCCCTGCATATAGGCTTAAGAACAAAACAGAATGTGTTTCTGAAGCCAATTACTTGTCAGCCAAGTACAATGAAGCTCTTCAATCCATGTTAAAGAAATGGCAATTGGAAAAAAGGGACATAAGTTATTCCTACTTTGATACTTATGCTGCCATTCAAGAACTCATTCAGAATCCAACTTCTTACGGATTTACTAATGTAAAAGTTGCTTGTTGTGGACTTGGTGAGCTGAATGCCCAAATTCCATGCCTGCCAATTTCAAACATTTGTTCCAACAGACAAGACCATATTTTCTGGGATGCATTTCACCCTACAGAGGCAGCTGCTAAAATCTTTGTGGATGAAATTTTCAGTGGAACTTCAAAATTCATATCTCCTATTAATATGGATCAGCTACTGGCTATCTGA 1098 0.3953 MRNRIVMGNYLLFLCFFIFSLGLLEAQKAPAVYVFGDSLVDVGNNNYLSLSIEKAILPHYGIDFPTKKPTGRFSNGKNAADLIAEKLGLPTSPPYLSLLSKVHNNSKNISVLGGVNFASGGAGIFNASDKGFMQSIPLPKQVDYYSQVHEKLTQQIGASTLEKHLSKSIFIVVIGGNDIFGYFDSQDLRKKNTPQQYADSMASTLKVQLQRLYNNGAKKFEIAGVGAIGCCPAYRLKNKTECVSEANYLSAKYNEALQSMLKKWQLEKRDISYSYFDTYAAIQELIQNPTSYGFTNVKVACCGLGELNAQIPCLPISNICSNRQDHIFWDAFHPTEAAAKIFVDEIFSGTSKFISPINMDQLLAI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02019 365 Gene3D SGNH hydrolase 22 352 IPR036514 -
Spst6g02019 365 SUPERFAMILY SGNH hydrolase 29 347 - -
Spst6g02019 365 CDD SGNH_plant_lipase_like 30 349 IPR035669 -
Spst6g02019 365 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 30 362 - -
Spst6g02019 365 Pfam GDSL-like Lipase/Acylhydrolase 32 345 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02019 Spst-Chr6 20351120 20354244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02019 29 363 Acyl Lipid Metabolism Gene Families AT4G10950 33.138 1.50e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02019 - - gmx:100790145 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02019 6 20351120 20354244 Spst6g02019 6 20351120 20354244 ECH