Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01989 ATGTCGGGGACTGATGCTCAAAATCCTCTTCTTGATGAAAGCACCTGCAGTTCCTTGTTACATAAGCTTCAGGAAATATGGGATGAGGTTGGTGTGAGTGATGAGGAGCGAGACAAGATGCTCCTTCAGATAGAACAAGAGTGCTTGGATGTGTACAAAAGAAAGGTCGAGCTGGCCACTAAGTCAAGGGCACAGCTACTTCAATCCTTGTCTGATGCAAAGCTTGAGTTGTCTAGTCTTTCATCGGTTCTTGGTGAGAACATTTCCACAGGAATGCCTGACAAGACTTCAGATACTATTAAGGAACAACTTGCAGCCATAGCACCAATACTTGAACAGTTATGGCAACAAAAAGAGGAAAGAGTAAAGGAGTTTTCAGATGTACAGTTACAGATCGAACAAATATGTAGAGACATAACTGGGGACCTGAACCCTGATCAGACTGGATCAGGATCATTTACAGTTAATGAGTCTGACCTGTCCTTGAAGAAGTTGGATGAATATCAATCCCAACTCCAAGAACTTCAACGGGAAAAGAGTGAGAGATTGCACAGGGTTCTAGAATATGTGAGTACTGTGCATGATCTTTGTGCTGTCCTTGGCATGGACTTCTTCAGTATTGTGACTGAAGTTCATCCAAGCTTAAATGATGCTATTGGTGTTCATTCGAAAAGCATAAGCAATGGCACACTAGCTATGTTGGCTAAGACAGTCTCTACACTGAAAGAAGATAAAAAGCAGCGGCTACACAAGCTTCAAGAATTAGCTTCTCAGTTGATTGATCTGTGGAATCTAATGGATACCCCTATAGAGGAAAGGAGACTATTTGACTATGTTACTTGTAATATCTCAGCTTCTGGAGATGAAGTCAGTGTTCCCGGGGCCCTTGCTCTGGATTTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAAGATGAAAGAAATTGCTTTCAAGAAGCAAGACGAGCTTGAAGAGATATATGCCCGGGCTCATGTAGAAATAAACCCTGAAGCTGCTCGAGGGAATATTTTATCATCGATTGACTCTGGAAACATTGAACCTTCTGAATTACTGGCTGACATGGACAAACAGATAGCTTCAGCAAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTGGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGAGATGAAAATAGGTATAGTGCAAGTAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAGCAAAATTCCAGCTTTGGTTGATACATTGATTGCTAAAACTCGCGCTTGGGAAGAAGTACATGACATGTCATTCACATATGATGGTGTTTCTCTCCTTGCTATGTTGGATGAATATGCCATGCTCAGGCATGATCGAGAAGAGGAAAAACGAAGGATGAGGGACCAGAAAAAGTACATTGAGCAGCAAACTACAGATCATGACTCTGTGTTTGGCTCAAGACCAAGCCCTGCAAGGCCACTTGGCATCAAGAAGGTAGTTGGCCCTCGTCTCACCGGAGGAGGACCAAACGGTGCTCCGATTCGCCGGCTATCTCTTAATGCTCATCATAATGGAAGCAGGTCTACAACAAAAGATGGAAAAAGGGATAATACTAGACCAGTTGCTCCTCTTAACTATGTATCAATATCGAAAGAAGATGTCTCTTCCCATGTTTCTGGTGCTGAACCAGTCCCAACATCACCCTAG 1764 0.4303 MSGTDAQNPLLDESTCSSLLHKLQEIWDEVGVSDEERDKMLLQIEQECLDVYKRKVELATKSRAQLLQSLSDAKLELSSLSSVLGENISTGMPDKTSDTIKEQLAAIAPILEQLWQQKEERVKEFSDVQLQIEQICRDITGDLNPDQTGSGSFTVNESDLSLKKLDEYQSQLQELQREKSERLHRVLEYVSTVHDLCAVLGMDFFSIVTEVHPSLNDAIGVHSKSISNGTLAMLAKTVSTLKEDKKQRLHKLQELASQLIDLWNLMDTPIEERRLFDYVTCNISASGDEVSVPGALALDLIEQAEVEVERLDQLKASKMKEIAFKKQDELEEIYARAHVEINPEAARGNILSSIDSGNIEPSELLADMDKQIASAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYSASRGAHLNLKRAEKARILVSKIPALVDTLIAKTRAWEEVHDMSFTYDGVSLLAMLDEYAMLRHDREEEKRRMRDQKKYIEQQTTDHDSVFGSRPSPARPLGIKKVVGPRLTGGGPNGAPIRRLSLNAHHNGSRSTTKDGKRDNTRPVAPLNYVSISKEDVSSHVSGAEPVPTSP 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01989 587 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 573 IPR007145 GO:0000226|GO:0008017
Spst6g01989 587 MobiDBLite consensus disorder prediction 568 587 - -
Spst6g01989 587 MobiDBLite consensus disorder prediction 479 587 - -
Spst6g01989 587 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 509 - -
Spst6g01989 587 Coils Coil 242 262 - -
Spst6g01989 587 Gene3D - 372 505 - -
Spst6g01989 587 Coils Coil 158 185 - -
Spst6g01989 587 Coils Coil 301 321 - -
Spst6g01989 587 FunFam 65-kDa microtubule-associated protein 6 372 505 - -
Spst6g01989 587 MobiDBLite consensus disorder prediction 479 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01989 Spst-Chr6 19619909 19624095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01989 13 526 EF-hand Containing Proteins AT5G62250 42.418 7.50e-121 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01989 K16732 - cave:132173906 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01989 6 19619909 19624095 Spst6g01989 6 19619909 19624095 ECH
Spst6g01989 6 19619909 19624095 Spst8g00923 8 8194414 8198096 PCT