Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01980 ATGGATGGTGAAATTGAAAGGTTGATCAAAGTATGGATTTCAGCCATCATAGGTCTATGTTATTGTTATTACTTAGCTTCTAGAATACCAAAAGGTTTACTGAGGCTTCTTTCCTTCCTTCCACTTCTCTTCCTCTTCCTTATCCTTCCATTAAACCTCTCTTCACCTACCTTAATTGGAATCACTTCCTTCTTCCTTGTTTTGCTTGGCACATCCAAGCTCCTTCTTTACTCCTTCAACCAAGGCCCTCTTGCTCTATCACCTCCATACATTGTCCACTTCATCTCCATAGCTTTTCTCCCCATCATCCCCAAACAACACCCTCCAACCAATGAAAACCACAAACCCAAATGGCTTGTGCCTCTAAAAGTGCTTATTTTTGCAATGATCATTCGTGTTTATGACTTCAAAGAAAACTTGCACCCTAATTTCATGTTGGTCATTTATTGCTGCCACGTTTACCTTTCACTAGAGCTGTTGTTAATCTTCATCAGTGTCACCATTCGAACCCTTTTCGGGTTTGAGATAGAACCACACTTCAACGAACCCTACATTTCTACCTCACTTCAAGACTTCTGGGGTCATAGATGGAACCTCATGGTTACTCTTATTCTACGTCCTACCGTATACAATCCTATACGCCGTATGTTTAAAAGTTTTGTGGGCTCCTCGTGTGCTTCGTCAGCTGCAATGTTGGCCACTTTTCTTGTCTCTGGACTCATGCATGAGCTAATTTATTATTACCTTGTGGCTGGCCACCGCGGGTGGCAGTTGCACCGTCTTGTGTCGGGGTTGCTTGTGGTTTCATTTTTGGCAATAACAGCAAATTGGTTGTTCTTTCCTCAATTGTTGAGGAATGGTGTGGATACGAAGGCTACTGAAGAGTATGCTAGTTTGGTAGAGTTTGCTAAGTCTAAGTTCTCAAAACAACATAATTATTCAGTTCTTCATGTGTAA 957 0.4159 MDGEIERLIKVWISAIIGLCYCYYLASRIPKGLLRLLSFLPLLFLFLILPLNLSSPTLIGITSFFLVLLGTSKLLLYSFNQGPLALSPPYIVHFISIAFLPIIPKQHPPTNENHKPKWLVPLKVLIFAMIIRVYDFKENLHPNFMLVIYCCHVYLSLELLLIFISVTIRTLFGFEIEPHFNEPYISTSLQDFWGHRWNLMVTLILRPTVYNPIRRMFKSFVGSSCASSAAMLATFLVSGLMHELIYYYLVAGHRGWQLHRLVSGLLVVSFLAITANWLFFPQLLRNGVDTKATEEYASLVEFAKSKFSKQHNYSVLHV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01980 318 Pfam Membrane bound O-acyl transferase family 177 252 IPR032805 -
Spst6g01980 318 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 253 306 IPR044851 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01980 Spst-Chr6 19468512 19469554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01980 1 304 Miscellaneous Gene Families AT5G55380 42.262 1.68e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01980 - - gmx:100810651 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01980 6 19468512 19469554 Spst6g01980 6 19468512 19469554 ECH
Spst6g01980 6 19468512 19469554 Spst8g00933 8 8255189 8256238 PCT