Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01978 ATGAAAGCCATGGATGGTGAAATTGAGAGGTTCATCAAGGTGTGGCTCACAACCATCACATGTTTATGTTATTGTTATTACATAGCTTCTAAAATACCAAAAGGTTTCTTCAGGCTTCTCTCCCTCCTTCCAATTCTCTACCTCTTCCTCATCCTTCCATTGAACCTCTCTTCCTTCCACCTTGGTGGCCCCACCACCTTCTTCCTTGTTTGGCTTGGCATTTTCAAACTCATCCTCTTCTCCTTCAACCAAGGCCCTCTTGCCCTATCTCCCCCAAACATTCTCCATTTCATCTCCATAGCTTCCCTCCCCATCAACCTCCAACACCACCACCCCACCAACGCCAACACAAAACCCAAATGGCTTTTCCTCCTAAAAATGCTTATTTTATCCATGATCTTTCGTGCTTATGACTATAGAGAAAATTTGCACCCTTATTTCATCCTAGTCCTTTATTGTTGTCACATGTACCTTGGCGTGGAACTTGTCTTAGCCCTTTCTGCTGTACCGGTTCGAACCCTTTTAGGGTTCAAAATAGAACCTCAATTTAATGAACCCTACCTTTCAACTTCCCTCCAAGACTTTTGGGGTCGTAGGTGGAACCTAATGGTTACTCGTATTCTACGCCCCACTGTATTCCACCCCGTATACCATATATCTACACATTTTGTGGGCCCCTCTTGTGCCCTCACAAGTGCCGTGTTGGCGACCTTCATTGTGTCTGGACTCATGCATGAGTTAATATATTATTATCTTGCACGTGCGCCTCCCACGTGGGAAGTTACCTTTTTTTTTGTTCTTCATGGTATGTGCACAGCGGCGGAGGTGGCGGTGAAGAAGGTGATGCTCCGCCGTGGGTGGCGGTTAAATGGAGTCGTGTCGGGGCCGTTTGTGGTGGCGTTCTTGGTGGTTACCGGAAGGTGGTTGTTTTTTCCTCAATTATTGAGGAATGGTGTGGATAGAAAGGCCATTGAAGAGAGTGCAACTTTAGTGGACTTTATAAAGTCTAAGCTGCCATTACATTTGTTTAATTTTTGA 1038 0.4528 MKAMDGEIERFIKVWLTTITCLCYCYYIASKIPKGFFRLLSLLPILYLFLILPLNLSSFHLGGPTTFFLVWLGIFKLILFSFNQGPLALSPPNILHFISIASLPINLQHHHPTNANTKPKWLFLLKMLILSMIFRAYDYRENLHPYFILVLYCCHMYLGVELVLALSAVPVRTLLGFKIEPQFNEPYLSTSLQDFWGRRWNLMVTRILRPTVFHPVYHISTHFVGPSCALTSAVLATFIVSGLMHELIYYYLARAPPTWEVTFFFVLHGMCTAAEVAVKKVMLRRGWRLNGVVSGPFVVAFLVVTGRWLFFPQLLRNGVDRKAIEESATLVDFIKSKLPLHLFNF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01978 345 Pfam Membrane bound O-acyl transferase family 180 265 IPR032805 -
Spst6g01978 345 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 5 337 IPR044851 GO:0006629|GO:0008374
Spst6g01978 345 PIRSF Wax_synthase 4 345 IPR017088 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01978 Spst-Chr6 19436869 19437906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01978 4 337 Miscellaneous Gene Families AT5G55350 48.503 1.01e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01978 - - gmx:102667540 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01978 6 19436869 19437906 Spst6g01978 6 19436869 19437906 ECH