Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01977 ATGACATCCTCAGACGAGGAGGCAGAGGCTCAGCTTCTATCTGTGTCAAATTACTACTTTGAAGATGACAAAGGCGCACCAGTGTGTTTTTCCATGTTGCCAATTCGATGGAGTGAGTCAGAGAGTCCAGTTGGCAAGAAAATGCAGATGTTCTTGCGCGGTTTTGCGGATAATGGGCTGCAGAAAATTTTTGTGCAAGTTGCTGCATGGAGGTTTGATCTCTCCTATGTGAGGCCTGAGATATTGGTGCTCTCAAATAATGGAAAATGGATTAAGCTTGAGAAGCCTAGGAAGAGCTATGAGGAAACCATAAGAACTATTTTGATCACCATTCACTTCCTGAGTTATGTGAAGAGGAATCCTGATTCATCGGCCAAGTCTGCATGGGATTACTTGAGTAAGAATAAGGAGTTTAGATCTTATGAAGTTATGCCTTCTCAAAATGACGTATTAAATCATATGACTTTAATGGGTGAAGCTATGAAAAGAGATGCTGGCTTAGCAAAGTCCAAGGTTTATCCAGGATTAAGAGGTAAATTTAAGGATGAGTTATCATTTAGAACTGCCTTCCTTTTGCTCATGGTGCGGGAAGATAAAAATAGGCTGAAGATTAAGAAACTTTCTGAAGAGGAAGTTAAAGATTTAGCACGACCTGGATTTATAATTGATGATACTGACAATGACTTGGTTGATGAAATTGGTGAAGAATCAGATGGGGAGGATGGGTTGTTTGATTCTGTTTGTGCGATTTGTGATAATGGTGGTGAACTTTTGTGTTGTGATGGAAAATGCATGAGGTCATTTCATGCTAATGAGGAGGATGGTGAAGAATCTAATTGTGCCTCTCTTGGTTTTAGTCAGAAGGAAGTTGATAATACATGTGTGGAGGTGCTGAATCCTACTGCTACAGAAGAGAGTGGCATTATTGGAGATGCTGAATAA 942 0.4013 MTSSDEEAEAQLLSVSNYYFEDDKGAPVCFSMLPIRWSESESPVGKKMQMFLRGFADNGLQKIFVQVAAWRFDLSYVRPEILVLSNNGKWIKLEKPRKSYEETIRTILITIHFLSYVKRNPDSSAKSAWDYLSKNKEFRSYEVMPSQNDVLNHMTLMGEAMKRDAGLAKSKVYPGLRGKFKDELSFRTAFLLLMVREDKNRLKIKKLSEEEVKDLARPGFIIDDTDNDLVDEIGEESDGEDGLFDSVCAICDNGGELLCCDGKCMRSFHANEEDGEESNCASLGFSQKEVDNTCVEVLNPTATEESGIIGDAE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01977 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 294 IPR013083 -
Spst6g01977 313 SUPERFAMILY FYVE/PHD zinc finger 237 270 IPR011011 -
Spst6g01977 313 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 292 - -
Spst6g01977 313 Pfam Cytosine specific DNA methyltransferase replication foci domain 10 134 IPR022702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01977 Spst-Chr6 19414760 19419433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01977 - - pvu:PHAVU_006G0498000 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01977 6 19414760 19419433 Spst6g01977 6 19414760 19419433 ECH