Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01968 ATGGCTCTCTCTCGTGTACTTGCTATACTCATTCTTCAGTACTCATTGGTAGAACTGGCTTCTTCAACTGGACCACCAAGTGGCTGGAAAACATTGCAAGGATCTCCACCGCTGGTCATAGCACGTGGCGGGTTTTCAGGGATATTTCCTGATTCAAGTTCAGTTGCCTATAGTTTGGCACTAAACACCAGCGGCCCAAATGTGATTCTATGGTGTGATGTGCAATTAACAAAGGATGGCACTGGGATTTGTTTCCCAGAGCTCAAGCTGGACAATGCCACTGATATTCCAATTGTTTACCAAGGCAAGGCAAAGCATCACTCAGTTAATGGGGTCTCAACCCGGGGATGGTTTTCTGTTGACTACAACTTTGATGAACTAGTAAATGTCTCTCTTGTTCAGGGAGTGTACTCTCGGACTAATATGTTCGATGGCAACAGGCTTCCCATTCTCCCTGTTGAAGAAGTAGCTAACTTAATAAAATCACCATCTACAGGCCTGTGGTTAAATATTCAGCATGATTCTTTCTTCAAGCAACAGAATTTGAGTGTAGAAAAATTTCTACTATCTCTCGCTGCCAGAAGAGTACCTGTCAGTTACATTTCATCACCTGAAGTAAATTTCTTAAAAAGAGTTAAATCAATCTTTAGTCCTCAAACAACCAGCTTGATCTTCAGTGTTCTAGAGCAGTCTAAGATTGAACCTACAACCAAGCAGAGTTATGGTGAACTCTTGAAAAATCTTGCATTAATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAGGGCTATATATGGCCTGTAGACTCAAGCCTTTCTCTACAACCTCATACCTCTCTTGTCTCAGATGCTCACAAAGAAAAGCTGCGAGTTTTTGTATCGGACCTTATCAACGATGTTCCATTTAGCTACAATTTCAGTTATGATCCGCTGGCTGAGTGTCTATCTTTCATTGATGATGGTGATTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCAGTTACTCCATCTGCAGCCATAACACCCCATTCAGATTCTAAAATCTCATCTCTTACTGCAGATTGCTTTTCTGGCCTAGGGAAAAATGCCACTAAACAAGAAGAGTATACAATGAAAGCAGGACAAGAAGCAAGAAATTTTCCACAGAGGGAACACAATATTTTTGTTGTCTTTATTGATCAGTTTCTTCTTTCATATTTTCATGATAAAGTGGACACTTTGGTCATCACAAAATATGGAGCAAGTGGAGATAATCCTGCTTGTACTGACATTGCATACAAGAAAGCTAAATCAGACGGGGCAGATGTACTTGACTGTCCTGTTCAAATGTCCAAGGATGGAATACCCTTTTGCTTAAGCTCTATAGATCTTTCAGAGAGCACAACTGTTGCTCATACAAACTTCAAAAACCGTGCTACAACTATTCAGGAGATCAAAAATAGCAGTGGCATATATACATTTAGCTTGACATGGGATGAGATAAAAACATTGACTCCCTCAATATTGAACCCTTATGAGAAATACAGATTGTTCCGGAATCCAAAATCCAAAAATCAAGGAAAACTGATAACCTTCTCTGAGTTTTTGCTCTTGTCTGAAGGCTCTCGCATCTTGATCAGCATAGAGAATGCTGCCTATCTCGCAGAGAAGCAGAATTTAAGTGTGATCAATGCGGTCCTTGATGCATTAAAGAAAACAAGACCAAGATCAGGCAAAGTTATGATTCAGTCAACTCATAGCTCTGTTCTTAAAATATTCTCAGATAAATCCAAATTTGAAAGGGTTTACAGGGTTGATGAGAACATTAGCGATGCTGCTTACTCGGCCATTAAGGACATAAAAACATTTGCTGATTCTGTGGTGATAGGAAAGAAGTCTGTTTTTCCTGAAACTATGGCCTTTTTGGTTAACTCTACAAACATTGTGGCAAAGCTAAAATCATTTAAGCTCCTAGTTTATGTAGAATCTTTCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCCGACGCATCTATCGAGATACATTCATTTGTCATTGGAACCAAGGTCAATGGCATTATTACTGACTTCCCCAAGACAGCTAATAGATACAGGAGGAACTTGTGTTTAAAGCATGGCCACAAAGCACCTTATATGAGCCCTATTGAACCTGGCAAACTTTTTCAACAAATTTCCACGTTGTTCCTTCCACCACTTCCCCCTCCACTCCCAGTCTTGACTGACAGTAATGTGACAGAGGCACCTTTGCCTGGTGTTTCTGCAAGATTTCCTTCTGCCAAGGCTGCTCCAAGAGTAGGTGCCATAGCTCCAGCCCCCATCAAAATGTAA 2334 0.4057 MALSRVLAILILQYSLVELASSTGPPSGWKTLQGSPPLVIARGGFSGIFPDSSSVAYSLALNTSGPNVILWCDVQLTKDGTGICFPELKLDNATDIPIVYQGKAKHHSVNGVSTRGWFSVDYNFDELVNVSLVQGVYSRTNMFDGNRLPILPVEEVANLIKSPSTGLWLNIQHDSFFKQQNLSVEKFLLSLAARRVPVSYISSPEVNFLKRVKSIFSPQTTSLIFSVLEQSKIEPTTKQSYGELLKNLALIKTFASGILVPKGYIWPVDSSLSLQPHTSLVSDAHKEKLRVFVSDLINDVPFSYNFSYDPLAECLSFIDDGDFSVDGVLSDFPVTPSAAITPHSDSKISSLTADCFSGLGKNATKQEEYTMKAGQEARNFPQREHNIFVVFIDQFLLSYFHDKVDTLVITKYGASGDNPACTDIAYKKAKSDGADVLDCPVQMSKDGIPFCLSSIDLSESTTVAHTNFKNRATTIQEIKNSSGIYTFSLTWDEIKTLTPSILNPYEKYRLFRNPKSKNQGKLITFSEFLLLSEGSRILISIENAAYLAEKQNLSVINAVLDALKKTRPRSGKVMIQSTHSSVLKIFSDKSKFERVYRVDENISDAAYSAIKDIKTFADSVVIGKKSVFPETMAFLVNSTNIVAKLKSFKLLVYVESFSNEFVSQAWDYYSDASIEIHSFVIGTKVNGIITDFPKTANRYRRNLCLKHGHKAPYMSPIEPGKLFQQISTLFLPPLPPPLPVLTDSNVTEAPLPGVSARFPSAKAAPRVGAIAPAPIKM 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01968 777 Pfam Glycerophosphoryl diester phosphodiesterase family 413 695 IPR030395 GO:0006629|GO:0008081
Spst6g01968 777 ProSiteProfiles GP-PDE domain profile. 37 340 IPR030395 GO:0006629|GO:0008081
Spst6g01968 777 ProSiteProfiles GP-PDE domain profile. 406 700 IPR030395 GO:0006629|GO:0008081
Spst6g01968 777 Gene3D Phosphatidylinositol (PI) phosphodiesterase 36 338 IPR017946 GO:0006629|GO:0008081
Spst6g01968 777 Gene3D Phosphatidylinositol (PI) phosphodiesterase 405 699 IPR017946 GO:0006629|GO:0008081
Spst6g01968 777 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 404 700 - -
Spst6g01968 777 CDD GDPD_SHV3_repeat_1 37 339 - -
Spst6g01968 777 SUPERFAMILY PLC-like phosphodiesterases 36 336 IPR017946 GO:0006629|GO:0008081
Spst6g01968 777 SUPERFAMILY PLC-like phosphodiesterases 407 700 IPR017946 GO:0006629|GO:0008081
Spst6g01968 777 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 35 339 - -
Spst6g01968 777 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 6 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01968 Spst-Chr6 19257389 19263495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01968 2 773 Receptor kinase-like Gene Family AT4G26690 50.891 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01968 - - gmx:100813869 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01968 6 19257389 19263495 Spst6g01968 6 19257389 19263495 ECH