Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01960 ATGTTCATAGAAAACTCAGACCTTGAATTCTTGGTGCTTACAAGGCTTGAAAAGTTTATACCTTTAGGAATCTCAGGGATGGGTTTCTCAGTGGCAGCTTCGTTAGGTACTCATATTGCACTGAGAAGCACTCATGAAGCAAGAATCAAGGGCCATTTTTTGTTCAAAAAAGAGGAGAATAATAGAATCTGTTTCAATTTCTCAAAGCACAAGGCAATTCAAAGAAAAATTTCTCTCAGCAATCAAGAGTTCAGTGAGTTCGATGAGAGGAAGAGCCCAGACGAGGTCAGAGCAGAGATTAAAAATTGTTATGAACTCATAAACAGATTAGGGAGAGGAGTTGTGTATCTGGGTTCTTCAAGGATGGGACCCAGCCATTCACATTATCTGCAAGCACAAGAGCTAGCTAAAGAGATAGCAAATCTTTTGGACTGCACTTCTTGGTCAGGGGCTGGACCAGGGCTAATGGATGCTGTCACTCAAGGTGCCATGCTAGCAGGAAAACCAGTTGGTGGATTCAAGATAGGAAAAGAAGCTGGTGAATGGACAACATCAAACTTTCATCCGTACTTACCATCAGAAAATTATCTTACCTGCAGGTTTTTCTCAGCTAGGAAGCATGGACTGGTGGACGCTGTAGTGAGGAACAATTCATTTGATAAGACTGCTGTGGTTGCCCTTCCTGGTGGGATTGGTACTTTAGATGAGGTGTTTGAGATACTGGCATTGATTCAACTGGAACGGATTGGATCAAAGTTTCCTGTTCCCTTGCTCTTGATGAACTATGATTCATTTTACTCAAAGCTGCTTGATTTTTTAAATGATTGTGAGGGTTTGGGAACTGTCTCCAAAGGAGAGGTTGCATCATTGTGGAAGGTTTGTAACAGCAACTCAGAAGCTTTAGCATACCTAGAAGAATTCTATAGCATTTCTTCTATTGACAAAAGTAAGAATGTAACTAAAATATATAGCACGTATGAATCACCATCCTCTTAA 996 0.4066 MFIENSDLEFLVLTRLEKFIPLGISGMGFSVAASLGTHIALRSTHEARIKGHFLFKKEENNRICFNFSKHKAIQRKISLSNQEFSEFDERKSPDEVRAEIKNCYELINRLGRGVVYLGSSRMGPSHSHYLQAQELAKEIANLLDCTSWSGAGPGLMDAVTQGAMLAGKPVGGFKIGKEAGEWTTSNFHPYLPSENYLTCRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDEVFEILALIQLERIGSKFPVPLLLMNYDSFYSKLLDFLNDCEGLGTVSKGEVASLWKVCNSNSEALAYLEEFYSISSIDKSKNVTKIYSTYESPSS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01960 331 PANTHER EXPRESSED PROTEIN 280 319 - -
Spst6g01960 331 Gene3D - 93 324 - -
Spst6g01960 331 Pfam Possible lysine decarboxylase 156 303 IPR031100 -
Spst6g01960 331 SUPERFAMILY MCP/YpsA-like 99 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01960 Spst-Chr6 19173719 19177189 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01960 - - gmx:100803538 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01960 6 19173719 19177189 Spst6g01960 6 19173719 19177189 ECH