Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01953 ATGGCATCAAACCAGATCCTGAGAGAACTACAATGGGCTCAGCAAGCTATAAAATCAGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTCTCCCAACCAACTTCAGGTTGTTATCAAGAAACAGACAACTCCATAAGTGTAAACATTTCCAAGGAAAATCTTCCATTCTTTTCCCACCTCTTGACAACTCTAGCAGCACCTAGCAGCCCCAACTCCTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAACAGGTAAGAAATCTTGGCACCTTGCTGGGGCATAACCAAAATGTACAACAAGTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGCCTATCGGACCTTTCTAACATTCTGAAGGGAAATAAGGTGATCAAAGAGGTCATGCTTTCAAAATCAGGCATCGGGTCTGTGGGAGCTGAACTCATTGCTTCTGCTCTTATGGTGAATGACAGTTTGGAGGAGCTGCAGATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCCAAGATGATTGAAGTTAACTCAACTCTTAAACTGTTGACAATTTTTGACTCCAATGCCATCACAGCTACCCCTCTTATATCTGCAGTTGTGGCAAGGAACAGAAGAATGGAAGTTCATGTATGGAGTGGGGAGAATGGGGAAAAGAGTTCCAAGGTGGTTGAGTTTGTACCTGAGAACAGCACACTTAGAATTTACAAGCTTAACCTTTCAGGGACTTGTAGGGTTACCTGCTCTTTAGGGATGAACTTTACCGTGAAGTCGCTTGACATGACCGGAGTTAAGCTAAAATCCCGGTGTGCCAAGGAATTTAGGTTGGTTTTGGAACAAAACCAGACTCTCAAAGAGGTAAACTTGTCTAGAACATGCCTTAAAGACAAGGGCATTGTGTATATTGCAGCTGGCCTCTTCAAGAACAGAAGTCTGCAAACCTTACATCTAAGTGGAAATTGGTTCAGTGGAATGGGTGTGGAGCATTTATTATGCCCTTTGAGTAGATTTTCAGCACTTCAAAGGCAAGCCAACACTACTTTGGCATGTATTACTTTTGGAGGAGAAAAAACAAGAATAGGAAGGGATGGTCTAGCTGCTATTGTACAGTTTCTTAAAACAAATGAAACAGTGAGGCAGTTGGGAATTCATGATGATGAGAGTTTGAGAGCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTTCAAGGATGCAAACGGGTGGAGGGAGAGATTTTGCTGCAGACAATTATGGAGACACTGCAGATAAATCCTTGGATCGAAGATATTGATCTCTCCAGAACACCTTTGCACAACTCTGAAAAGACTCGGTTGATTTATCAGCGATTAGGCCAGAATGAGAAGACTGAACCAGATATGGATTCGGTCAAGGACATGCCTCTAACAGAACCCAAAAGTTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGTAAAACCGCACTTTGTCATTCAATAGCACAAAATTTCTCTGCTTCGGCACTTCCGTACTTGGATCAAGTCAGAACAATAGTCAACCCAGTGGAGCAAGCTGTCAGATCAGTAGGAATGAAGATAAAAACTTTCAAAGATGAGGATACAAGGATTTCAATATGGAATCTTGCTGGTCAGCACGAGTTTTTATCTCTCCATGATCTTATGTTCCCAGGGCATGGGAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCCAAAAGTTCAACCGAAATTGAAGAGGATCTGCAGTATTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGAGCAATACAACAGTGCATGCTACCTAGTGTTGCTGTTGTTCTCACACACTCTGACAAAATCAACCAACCATCACAAAATTTGCACCACACGGTGGATTCAATTCAGAGGCTCAGAGACAAGTTCCAAGGCTTTGTTGATTTTTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATCCTCCAAAGAGTGCCACGGGTTTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAACCAGCTATGAAGTGGAAAGAGTTTGGTGAACTATGCCAAACGAAAGTTCCACCTTTGAGAATTCGATCAAGACATGACAATAAAGAGAAGGTGGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATGGGTGAAGTGATTTATTTTGATGAGTTGGGTTTTCTAATTATAGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGTCAGCTCATAAAGTTGAATGTTAGGAAGCAACACTCCTCAGAAAAAAATGGATTTGTTAGCAGGAAGGAATTGGAAAAAATTTTAAGAGGAAGTTTGCAAAGCCCTATCCCTGGTATGGGTTCAAAGGTGTTTGAGAATTTAGATGCTAGTGACCTTGTGAGAATGATGCTAAAACTTGAACTTTGTTATGAGGAAGACCCATCAGATCCAAATTCTCTGCTATTGATTCCTTCCATTCTTGAAGAAGGGAGAGGAAAGCCTCAGAGGTGGCAGCTAAGCATGCCAGACTGTGTTTATGCAGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCTGGTTTCTTCCCTCGTTTACAGGTGCAACTTCACAACAGAATTAAGGCTCTAAAGGATCAGCATGGGGCAACTTACAGTCTTGAGAAGTACCTTATTTCAATCAGCATTAATGGAATCTACATAAGAATAGAACTTGGAGGACAGTTGGGTTACTATATTGATGTCCTTGCATGCTCCACCAAAAACTTGACGGAAACTTTAAGAGTCATTCATCAACTTGTTATCCCCGCAATCCAAAGTGTTTGCCATGGGATCCCCTTGACTGAGAATGTCTTAAGGCCTGAATGTGTGAGAAAACTGACACCTCCTAGATACAGAAAAACTCAATTTGCTTCCCTGCAGCAACTGAAAGAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCCGGTAAGCCTATTCTTCAAGATGGATTTGATTTTGCAAGAGACCTTTTATCAGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATCACGACTTGTACAATCTTGCACAAGAACTGCAAGTTCCTCCAGAAAATAACCCTGAAGGGCAATCTATAGCCTTAAGAGATGAAGCTGCAAGGGTTGAACCAACCTTTGGTGGCATTGCCAAAGGGGTGGAAGAAGTTTTGCAAAGGCTCAAGATTATTGAGCAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGCCTCAGATATTATGAACATAGACTTCTCCTCGAGCTTCATCACAAAGTGAACCACCTTGCCACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCTAACATGATATATTTTGTAAGAACAGAAAACTACACAAGGAGATTAGTCACCACCATGCTTTCCGGCATGAATGCTCTCAGACTTCACCTGTTATGCGAGTTCCGGGGACAAATGCATGTTGTGGAAGATCAGATGGGGTGTGAAATCATGCAAGTTGATAATGCTGCTGTGAAGTCTTTGGCTCCATACATGAAAAAGTTTATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGAATGGGGCAAATGATACCTGACTTGAGTAAGGAGGTGGCTCATCTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGAGCAAGTGCAGCTGGTGTTTTAGGTGCTGCCGCTATGGGTCGTAGAAACAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTAAGAGAGCGTAAGTGTTCCTCAGGGAAGGATATTGCTGAAAAGTTTGGACTGTGGCGAGTCAGGTACAGGGACAATGGTCAAATTGCATGGATATGCAGGAGGCACATATATGCAAGATCTGCAGAGATAATTGAAGTACCTATTTGA 4128 0.4215 MASNQILRELQWAQQAIKSEGLNLHSISFYLSQPTSGCYQETDNSISVNISKENLPFFSHLLTTLAAPSSPNSSLRNLEFHRVEWDSQQVRNLGTLLGHNQNVQQVVFRRNRFNGKSLSDLSNILKGNKVIKEVMLSKSGIGSVGAELIASALMVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVVARNRRMEVHVWSGENGEKSSKVVEFVPENSTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVKLKSRCAKEFRLVLEQNQTLKEVNLSRTCLKDKGIVYIAAGLFKNRSLQTLHLSGNWFSGMGVEHLLCPLSRFSALQRQANTTLACITFGGEKTRIGRDGLAAIVQFLKTNETVRQLGIHDDESLRADDFVKIFKSLEKNASLKCLSLQGCKRVEGEILLQTIMETLQINPWIEDIDLSRTPLHNSEKTRLIYQRLGQNEKTEPDMDSVKDMPLTEPKSCRVFFCGQECAGKTALCHSIAQNFSASALPYLDQVRTIVNPVEQAVRSVGMKIKTFKDEDTRISIWNLAGQHEFLSLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHSDKINQPSQNLHHTVDSIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQTKVPPLRIRSRHDNKEKVEMKRRAIATCLHHMGEVIYFDELGFLIIDCEWFCGEALGQLIKLNVRKQHSSEKNGFVSRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEEDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCVYAGRHLECDDSSHMFLTPGFFPRLQVQLHNRIKALKDQHGATYSLEKYLISISINGIYIRIELGGQLGYYIDVLACSTKNLTETLRVIHQLVIPAIQSVCHGIPLTENVLRPECVRKLTPPRYRKTQFASLQQLKEALLSLPAESMYDYQHTWSPVLDSGKPILQDGFDFARDLLSDDDFREVLHRRYHDLYNLAQELQVPPENNPEGQSIALRDEAARVEPTFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHHKVNHLATFNVQVEERKVPNMIYFVRTENYTRRLVTTMLSGMNALRLHLLCEFRGQMHVVEDQMGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLCGAAGASAAGVLGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERKCSSGKDIAEKFGLWRVRYRDNGQIAWICRRHIYARSAEIIEVPI 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01953 1375 Gene3D Ribonuclease Inhibitor 49 217 IPR032675 -
Spst6g01953 1375 Gene3D Ribonuclease Inhibitor 348 478 IPR032675 -
Spst6g01953 1375 Coils Coil 1122 1149 - -
Spst6g01953 1375 Gene3D - 490 694 IPR027417 -
Spst6g01953 1375 PANTHER PROTEIN TORNADO 1 1 1374 - -
Spst6g01953 1375 Pfam Leucine Rich repeat 287 310 IPR001611 GO:0005515
Spst6g01953 1375 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Spst6g01953 1375 SUPERFAMILY RNI-like 70 212 - -
Spst6g01953 1375 Gene3D Ribonuclease Inhibitor 222 347 IPR032675 -
Spst6g01953 1375 SUPERFAMILY RNI-like 243 462 - -
Spst6g01953 1375 Pfam C-terminal of Roc, COR, domain 721 924 IPR032171 -
Spst6g01953 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 691 IPR027417 -
Spst6g01953 1375 SMART LRR_RI_2 288 315 - -
Spst6g01953 1375 SMART LRR_RI_2 156 183 - -
Spst6g01953 1375 SMART LRR_RI_2 316 343 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01953 - - gmx:100817598 2501.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01953 6 19108521 19113294 Spst6g01953 6 19108521 19113294 ECH