Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01931 ATGAACGTGGGCGACCTCAACAAGGTATGGGAGATCAGAGCTCTGAAGAGGAAACCCGCGGCAGAAGAAGCGACGAAGATGTTGGAGAAGATCGCTAAACAGGTCCAACCCATCATGCGTAAACACAAATGGAGGGTCAAGCTCCTCTCCGAGTTTTGCCCTGGAAATCCATCTCTCCTGGGTTTGAACGTTGGAGCTGGTATACATGTGAAGTTACGGCTACGTAGGCCGAACAGGGATTTGGACTTTTATCCGTTTAATCAAGTTCTTGATACGATGCTTCACGAGCTTTGCCATAATGCCCATGGCCCTCATAATGCCAACTTCTACAAGCTTTGGGATGAGCTTAGAAAGGAATGTGAAGAGTTGATGACTAAGGGAATAACTGGCGCAGGAGAGGGGTTTGACCTTCCAGGAAGGCGTTTAGGTGGTTATTCCCGACAACCTCCACTTCCATCCCTCCGTAAAACTGCACTGGAAGCTGCAGAAAAGAGAGCACGATTGGGATCTCTTCTTCCATCTGGACCTAAACGTGTAGGTGGTGATAGTGTTATAATGAAAGCCCTTAGTCCAGTACAAGCTGCTGCAATGGCTGCAGAGCAGAGATTACAGGATGATATATGGTGTGGTTCTCAATCTTCTGAACATTTGGGTCACGAAGATGTTGACTATGAAGATGATGAGAACATTGTGCATAAGGGGAAAAATGTGGGAACCTCAAGACTAACAGACGATGCTGCTCTACCATCGAAGCTGTTATCTCAAAAAAGAAGTCAGGATACCGATTCAAGTTTACCTGTTGGCTCCTCACCTAGTACTTCTGAGTTTATAGATTTGACAATGGATACACCAAAAACTGGATCTAAACGAAGATGCTGTGGATCAGAAAACATTTCACATTCTCAATCCAATTCTCAGGCAGGACCTAGTTTGGGAAATTTATCAAGTGTGTCTGTATCTGGTGATAATAGAACATTTCATTCTGAAGAATCTGGAATGTGGGAGTGTACGATGTGCACTCTATTGAATAAAAGATTGGCTCCCATATGTGAGTTGTGTGGCACTCACCAGCCAAAAGATGTTACTACCAAATACAACACTTGGTCTTGCAAATTCTGTACGTTGGAGAACAATGTGAAGTTGGAGAAGTGCTCGGCCTGTGATAGGTGGAGATACTCTCATGGCCCACCAGTGTCAACCCTGGCACCTAATGTTGGTACATAG 1224 0.4493 MNVGDLNKVWEIRALKRKPAAEEATKMLEKIAKQVQPIMRKHKWRVKLLSEFCPGNPSLLGLNVGAGIHVKLRLRRPNRDLDFYPFNQVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMTKGITGAGEGFDLPGRRLGGYSRQPPLPSLRKTALEAAEKRARLGSLLPSGPKRVGGDSVIMKALSPVQAAAMAAEQRLQDDIWCGSQSSEHLGHEDVDYEDDENIVHKGKNVGTSRLTDDAALPSKLLSQKRSQDTDSSLPVGSSPSTSEFIDLTMDTPKTGSKRRCCGSENISHSQSNSQAGPSLGNLSSVSVSGDNRTFHSEESGMWECTMCTLLNKRLAPICELCGTHQPKDVTTKYNTWSCKFCTLENNVKLEKCSACDRWRYSHGPPVSTLAPNVGT 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01931 407 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Spst6g01931 407 ProSiteProfiles Zinc finger RanBP2 type profile. 364 393 IPR001876 -
Spst6g01931 407 SMART zf_4 332 356 IPR001876 -
Spst6g01931 407 SMART zf_4 366 390 IPR001876 -
Spst6g01931 407 MobiDBLite consensus disorder prediction 254 312 - -
Spst6g01931 407 Pfam WLM domain 8 203 IPR013536 -
Spst6g01931 407 Gene3D - 327 367 - -
Spst6g01931 407 MobiDBLite consensus disorder prediction 254 281 - -
Spst6g01931 407 MobiDBLite consensus disorder prediction 290 312 - -
Spst6g01931 407 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 407 - -
Spst6g01931 407 ProSitePatterns Zinc finger RanBP2-type signature. 368 387 IPR001876 -
Spst6g01931 407 ProSiteProfiles Zinc finger RanBP2 type profile. 330 359 IPR001876 -
Spst6g01931 407 ProSitePatterns Zinc finger RanBP2-type signature. 334 353 IPR001876 -
Spst6g01931 407 Pfam Zn-finger in Ran binding protein and others 331 358 IPR001876 -
Spst6g01931 407 SUPERFAMILY Ran binding protein zinc finger-like 329 357 IPR036443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01931 K22685 - gmx:100795976 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01931 6 18725864 18728285 Spst6g01931 6 18725864 18728285 ECH