Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01917 ATGGATGAGGAAGAACCAGTGAATGAAGTTTCTAAAACTGATTCAAATGGAAAGAGCTCTCCGGAGAAAACTTTGGATGCAAGTACTGAGAAAAAAAGCATGGAAACTGCTGAAGGAAAAGTCTTGGAGAACAATGGAATCAAAACGTTGAAAGATAATAATGTGAAAGAAATTGATGATAAGAAAGCTGATAATGTGGAGAAGGTAGTAGAGGACAGGAAAGTTGGTGCAGTGGAAGAAGCGAAAGGGGATAAGAAAGAAGCAAAAGATGGTAAGGCAGAAGATGGAAAGGAGGGAGCAAAAGAGGATAAGAAAGAAGATGGAGTGGAAGATGCAAAAGAGGATAAGAAAGAAGGGGTGGATGTAAAGGATAAGAGAGATGGGGTGGATGAAGTAAAAGAGGATAAGGAAGTTGATGGTGTAGGAGTAAAGGAAGGTATGGAAGTTGATGTCAAGGAGGATAAGGAAGTTGACGGTGTGAAAGAAGCTAAGGAAGATAAGGAAGTTGATGGTGTAAAAAATATAGTAGAAGATAAAAAAGGTGATGAATTGAATGAAATAGAAGAGGAAAAGAAAGATGTTCATATACCTGAGACTGATAAAATGGGTGAAGACACTGAGGTTAAGGAAACAGTGGAAGATAAACAAGAAAATGACGAAGTGGAAACTGAGAAACCAGAAGTAGATGCTATGGAAGTAGAGGATGGCATTAAGGGGAAGGAGGACAGCAATGAAAAGAAGAAAGATGAAGTGGCGACGGAGGAGGATCAGGATGAAGATGAAGATAAGGATAATTCTGGTAAGTCAAAAGCAGAAGAGAAGCCAGAAGATAGTAAGGGTAAAAAAGGATCAAAAAAACGTGCAATAGAGAAGATCAATGAGGAGAAAGTTAAAGAAAAAAGAAAGGAACTGAAAAAAATAGAACCAAGGACTCCTACTATCGACCGCCCCGTGCGGGAAAGGAAATTAGTTGAGAGGTTGGTAACATCAATTGAGAAAGATGCGACCAAAGAATTTAACATTGAAAAGGGCCGTGGCACACCTTTAAAAGATATACCAAATGTGGCATTTAAGCTATCCAGAAGAAAGACTGATGATACCTTCAAATTACTCCATACAATTCTCTTTGGAAGGAGAGGGAAGGCAATTCAGATAAAGAGTAATATATCAAGGTTTTCTGGTTTTGTGTGGCATGACAATGAGGAAAAGCAAATGATTAAAGTAAAAGAAAAACTTGACAAGTGTAAGAAGGAGAAGTTATTGGAATTCTGTGATGTGCTTGATATAACAGTTAACAGGGCAACAATGAGGAAGGAAGATATTATTGCTAAGCTGATAGACTTTTTAGTTGCCCCTCATGCAACCACAACTGTGTTACTTGCAGAAAAAGAGAAGCCCAGTAAAAGAAAAAAGCGCAAGCGTGTCGTAAAACAGGGTTCATCAACATCTGGGACAACTTCTAGACGTTCTGGGAAGAGTCGAAAGAAAAACGAAGATTCTTCAGTTGTGGGGACAAAGAGTACTACTGACACAGAAGATGAGTCAGAGGAAGAAGTGGAAGATGAAGAAAATGAGGAGGATAATGAAAATGGTGTCGTTGACAAATCTGAGGATGATACATCAGAGAAATCTGAAAGTGAAGATAAAAATGATTCTGAGAGTGAATCTGAAGATATGAAAAAAAAGAAAAAAACTTCTAAAACATCATCCACGAAGAAAGAATCTGCTAAGAAAGGTAAAATTGAGAAAATTCCAGTTGCTGATAAATTTCGCTCACCCCCAAAAAGAACACCAAAGAAATCATGGTCCAACCTCTCAAAGTCTGATGATGATAGTGATGAAAGTCCAAAGGTTTCAAGGAAGAAGAAAAATGAGAAAGGAGGAAGCCAGAAGACATCAACACCAACTAAACCTGCCTCCAAAGAGAAAACTGCAGAAAAGGTTTCCAGAGGAAAGGGCAAGAAGAAAGAGAAGTTGAGCCCCAGTGATAATCAGTTACGCGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCTACATTTACTGACATTCTGAAGAAACTTGCTAAACAATTTGATATGGATCTCGCCCCGAAAAAGGCATCTATAAAGCTCATGATTCAGGAAGAGCTGACAAAACTAGCTGCTGAAGCGGATGATGATGACAGAGAAGAGGATACAGAGAAAGATGAAGCCCTATCTACAGGCCAGAAGGTTGAAGCTTTGATTGATGAGTAG 2247 0.3863 MDEEEPVNEVSKTDSNGKSSPEKTLDASTEKKSMETAEGKVLENNGIKTLKDNNVKEIDDKKADNVEKVVEDRKVGAVEEAKGDKKEAKDGKAEDGKEGAKEDKKEDGVEDAKEDKKEGVDVKDKRDGVDEVKEDKEVDGVGVKEGMEVDVKEDKEVDGVKEAKEDKEVDGVKNIVEDKKGDELNEIEEEKKDVHIPETDKMGEDTEVKETVEDKQENDEVETEKPEVDAMEVEDGIKGKEDSNEKKKDEVATEEDQDEDEDKDNSGKSKAEEKPEDSKGKKGSKKRAIEKINEEKVKEKRKELKKIEPRTPTIDRPVRERKLVERLVTSIEKDATKEFNIEKGRGTPLKDIPNVAFKLSRRKTDDTFKLLHTILFGRRGKAIQIKSNISRFSGFVWHDNEEKQMIKVKEKLDKCKKEKLLEFCDVLDITVNRATMRKEDIIAKLIDFLVAPHATTTVLLAEKEKPSKRKKRKRVVKQGSSTSGTTSRRSGKSRKKNEDSSVVGTKSTTDTEDESEEEVEDEENEEDNENGVVDKSEDDTSEKSESEDKNDSESESEDMKKKKKTSKTSSTKKESAKKGKIEKIPVADKFRSPPKRTPKKSWSNLSKSDDDSDESPKVSRKKKNEKGGSQKTSTPTKPASKEKTAEKVSRGKGKKKEKLSPSDNQLRDAICEILKEVDFNTATFTDILKKLAKQFDMDLAPKKASIKLMIQEELTKLAAEADDDDREEDTEKDEALSTGQKVEALIDE 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01917 748 Pfam DEK C terminal domain 661 714 IPR014876 -
Spst6g01917 748 MobiDBLite consensus disorder prediction 50 222 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 461 665 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 719 748 - -
Spst6g01917 748 Coils Coil 398 418 - -
Spst6g01917 748 Gene3D - 653 716 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 602 628 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 511 533 - -
Spst6g01917 748 FunFam DEK domain-containing chromatin associated protein 652 716 - -
Spst6g01917 748 Coils Coil 505 525 - -
Spst6g01917 748 PANTHER DEK PROTEIN 206 730 IPR044198 GO:0003677|GO:0006325
Spst6g01917 748 MobiDBLite consensus disorder prediction 640 665 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 1 294 - -
Spst6g01917 748 SUPERFAMILY DEK C-terminal domain 655 714 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 230 253 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 263 294 - -
Spst6g01917 748 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 660 715 IPR014876 -
Spst6g01917 748 MobiDBLite consensus disorder prediction 534 595 - -
Spst6g01917 748 MobiDBLite consensus disorder prediction 24 38 - -
Spst6g01917 748 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01917 Spst-Chr6 18389182 18395517 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01917 K17046 - gmx:100812631 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01917 6 18389182 18395517 Spst6g01917 6 18389182 18395517 ECH