Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01902 ATGTATATGATATTCTATAATTTGGATGTGTTTTTTAAGGAAGCAATGAAAACTGTGAAAGAGCTCAGATATCTGAAGGTCATAGTCCCATGTGAAAGAGAATTTGCAGAAGAAGAGGAGGAGAAGGCGAAACTGTGTGACCAACCCAGCCAAGTCGCTCCCTTCCAAGAAAGAAAGGCATCGAGAAAAAAGCCAACGGCACCTCACGCCGTCACCGTTTGCCAGCTCACACTTCCGTACCTTTCCCCACGCCACGTCACCACTGACGCTTATTGTCTCGGCACGTTGCTCCGTCCCCGCAGAACACGTAACGACGTTCCACGAATCGCGTTACCAACGCCCTGTCGTATGCGATTCTCCAATCTGGCGCAATCGAAGTCTGTTCAAGAAAAGGGTCGGCCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCAGCCTCAGCTGAGGGGTTCACAGTGATATTTAATAAGGCTAGGGATGAGAAAAAGACAGGTGGCAATCCTGAGTCGCCAGCAAAGACTGCTACTGATCCTCATAGCAAACCTGCCGTAGATCCTGGCAAAACTCAGACTAAAAAATGGTTTTGCTGCATGCAAAACCCATCTGCTGAATCATAG 621 0.4767 MYMIFYNLDVFFKEAMKTVKELRYLKVIVPCEREFAEEEEEKAKLCDQPSQVAPFQERKASRKKPTAPHAVTVCQLTLPYLSPRHVTTDAYCLGTLLRPRRTRNDVPRIALPTPCRMRFSNLAQSKSVQEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPAKTATDPHSKPAVDPGKTQTKKWFCCMQNPSAES 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01902 206 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 103 197 IPR040387 -
Spst6g01902 206 MobiDBLite consensus disorder prediction 155 194 - -
Spst6g01902 206 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 130 165 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01902 Spst-Chr6 18165203 18169553 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01902 - - gmx:100305826 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01902 6 18165203 18169553 Spst6g01902 6 18165203 18169553 ECH