Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01901 ATGAAGGTAGGGCTATCGAACTTCGCCACCGCAGTGGTAATCTTTTCCAGCCTGAATGCAGTGCTTGGGATCAGATTTGTGATTGACAGACATGACTGTTTCTCTCATGATGTTCAGCATGAAGGGGATAGAATCCATGCTTCGTTTGTTGTCATCAAGGTTGAGGCAGCTTGGCAATATACTAATGATGGTGTAGACCTTGAGGTGAGGGATCCTTCTGGGGAGCCCCTTCGAGAATATCATGACATGACAAGTGAAATATTCGAATTTGTGGCTCGAAGCTCTGGACCCTATCGCTTCTGCTTCACCAACAAGTCTCCCTATCATGAAACAATTGATTTTGATGTCCATTCTAACCACGTTGATTTTACTGATCAGCATGCAAAAGATGAGCATTTAACTCCTCTGTTTGAACAGATAGTTAAGTTAGAACAAGCTCTTTTCAACATCCAGTATGAACAGCATTGGCTTGAGGCTCAGACAGAACGCCAGGCAATAATAAGCAATGCAATGAGCACGAGAACAATTCACAAGGCCCTGTTTGAATCAGCAGCACTAATGGGTGCCAGCGGCCTCCAAGTTTATCTTCTTCGTCGCCTCTTTGAAGGAAGACTTACAATATAG 624 0.4391 MKVGLSNFATAVVIFSSLNAVLGIRFVIDRHDCFSHDVQHEGDRIHASFVVIKVEAAWQYTNDGVDLEVRDPSGEPLREYHDMTSEIFEFVARSSGPYRFCFTNKSPYHETIDFDVHSNHVDFTDQHAKDEHLTPLFEQIVKLEQALFNIQYEQHWLEAQTERQAIISNAMSTRTIHKALFESAALMGASGLQVYLLRRLFEGRLTI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01901 207 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 12 204 IPR015720 -
Spst6g01901 207 ProSiteProfiles GOLD domain profile. 31 118 IPR009038 -
Spst6g01901 207 SMART EMP24_GP25L_2 23 202 IPR009038 -
Spst6g01901 207 Pfam emp24/gp25L/p24 family/GOLD 31 202 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01901 Spst-Chr6 18162334 18164169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01901 - K20347 gmx:102665223 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01901 6 18162334 18164169 Spst6g01901 6 18162334 18164169 ECH