Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01893 ATGGTAGGTCAAAATGGCACAATCGAAACCCCACAAATGGCTTCATCGAAGACGAGAAAGCGATTTGTGAATTGTGCCTTGGAAGGTGGAGACTTTGATGGTGTTGGGGTTCTGGGTGTTTTTGAATTGTTGGGAGAAGCTGCTTTTCGATTTTTCGTTTGTTTTGCTTCGTTGGCTGTGGTTTCAATTCATGCTGTGTTTGCGGCGTTTGATGATGTTTTTCTGTCGTTTTCGGGTCGCTTTGACCGACTTGAGGGGCTATTAATTTGCAGTGTTCTCCACTCTGCCTTAAGGGTCCTTGACCTCTCAATTTGTTATGAAGGATGGATTTTGGTTTGTGGTGTGGATACTAGTTGGTTATTGTGTGAGGATTATGCCGATTTTTTTAAGGTTCTTATTCGGTGGAACTGGAGATATTCTGGAATCTTGGAGGCTGTTGGAGACACAATGGTAGCAAAAATCCGGCAAAGTGCTACTGAGTCTCCTAATCCGAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCGGTTAAAGATGCTGTCTCTCTCTTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCAATCATTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATGTAGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTAAAAGGACAGTTGAGGATCTGACACACAAGATAAAAGTTATTAGTGATTCTAGGGAATTAGCAATCAATGCTACAGAAGCTGCAAAGAGTCAGGCAAAACAACTTACAGAAGAAAAGTATGGTATACCTGACATAACAGATGGTGCTTGGAAGGAAGAATTAGATTCTGCAATTACAAGGTATGCATCTGTCATGACGGAACTTGCTACTGCAAAGCAAGTACTGAGCAAGACTCGACAAGAGTATGATTCGTCCTTGGATGCAAGAAAGTCTGCTGTCAAGCTAGCTGCAGAAGCTGGAGATGCATTGAAGGAAAACACAGAAAGAGCATCTGAGCTTTCTAAAGAAATTTCATCTGTAAAGGAGTCGATTGAACAATCAAAGCTTGCATCTATTGTAGCACAGCAGCAGCAAGCAAATATTGTGGCTGAGAAAGATGTTCTAAGACAATCATATAAAGCTACCCTGGAACAGTCTGAAAAAAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCTGAGCTTGCCAAAAATCTTGAAATGCAGCTGGCTGAGACAATGAGTGCAATTGGGACTCTGCAAAAGGAAATGGAAAATAAAAGGACATCAGACTTGGACTCTGTGAAAACTGTCACTTCGGAGCTTGATGATGCTAAGGAGTCACTGCAAAAAGTAGCAAATGAGGAAAGCTCTCTTAGAAGTTTAGTGGAATCTCTCAAGGTGGAACTCGAGAATGTAAAAAAAGAACATTCTGAATTGAAGGAGAAGGAATCTGTAACTGAATCAATTGTTGGGAATCTGCACGTCAAGCTCCGGAAAAGCAAGTCTGAACTTGAAGCCTGCATGGCAGAAGAATCTAAAGTTAGAGGTGCATCTGAGGAAATGATCTTGACGCTTAGCCAGCTGACATCTGAAACTGAAAATGCTAGGAGGGAAGCAGAAGATATGAAGAACAAGACAGCAGAATTGAAGAAGGAAGCTGAAGTTACCATGCTTGCATTAGAAGAAGCAGAGAAAAAGCTTAAAGTGGCGCTGGAAGAGGCAGAAGCAGCAAAAGCAGCGGAGAAAAGTGCTCTTGAGCAGATTACTGTTTTAACTGAAAGAACTACTGCTGCACGTGCATCAACATCTGAATCTGGTGCTGTGATTACAATCTCAAAAGAGGAGTTTGACTCACTAAGCCATAAAGTTGAGGAGTCTGACAAATTAGCAGACATGAAAGTGGCCGCTGCCAAGGCACAAGTTGAAGCTGTGAAGGCTAGCGAAAATGAATCTCTCAAAAGGTTAGAAACAACTCAAAAGGATATTGAGGATATAAAGGCTGCAACGCAGGAAGCTCTGAAAAAGGCTGAAATGGCTGAAGCAGCAAAGAGGGCAGTGGAGAGTGAGCTCCGAAGATGGCGCGAAAGGGAGCAGAAGAAGGCTGCAGAAGCTGCATCTCGAATTCTGGCTGAAACACAGGTGTCAACAGAATCATCTCCACAGCATTATAGGATTCAAAAGCAGAGTGCTCCTCATACAACAGTGGAGGTGAGGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAAAAAGCCCTCTTGCCTAATATCAGTGGCATCTTCCAAAGGAAGAAAAACCAGGTTGAGGGTGGCTCCCCTTCTTATCTTCCTGGTGAGAACCCTGTATGA 2409 0.428 MVGQNGTIETPQMASSKTRKRFVNCALEGGDFDGVGVLGVFELLGEAAFRFFVCFASLAVVSIHAVFAAFDDVFLSFSGRFDRLEGLLICSVLHSALRVLDLSICYEGWILVCGVDTSWLLCEDYADFFKVLIRWNWRYSGILEAVGDTMVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPIIKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKAQALVELERAKRTVEDLTHKIKVISDSRELAINATEAAKSQAKQLTEEKYGIPDITDGAWKEELDSAITRYASVMTELATAKQVLSKTRQEYDSSLDARKSAVKLAAEAGDALKENTERASELSKEISSVKESIEQSKLASIVAQQQQANIVAEKDVLRQSYKATLEQSEKKLLALKKEFSPELAKNLEMQLAETMSAIGTLQKEMENKRTSDLDSVKTVTSELDDAKESLQKVANEESSLRSLVESLKVELENVKKEHSELKEKESVTESIVGNLHVKLRKSKSELEACMAEESKVRGASEEMILTLSQLTSETENARREAEDMKNKTAELKKEAEVTMLALEEAEKKLKVALEEAEAAKAAEKSALEQITVLTERTTAARASTSESGAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENESLKRLETTQKDIEDIKAATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQSAPHTTVEVRKFEKEKVSVSKKALLPNISGIFQRKKNQVEGGSPSYLPGENPV 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01893 802 MobiDBLite consensus disorder prediction 732 754 - -
Spst6g01893 802 Coils Coil 351 371 - -
Spst6g01893 802 Coils Coil 676 717 - -
Spst6g01893 802 MobiDBLite consensus disorder prediction 732 756 - -
Spst6g01893 802 MobiDBLite consensus disorder prediction 783 802 - -
Spst6g01893 802 Coils Coil 397 417 - -
Spst6g01893 802 Coils Coil 423 443 - -
Spst6g01893 802 Pfam Weak chloroplast movement under blue light 170 720 IPR008545 -
Spst6g01893 802 Coils Coil 455 503 - -
Spst6g01893 802 Coils Coil 210 286 - -
Spst6g01893 802 Coils Coil 546 612 - -
Spst6g01893 802 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 169 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01893 Spst-Chr6 18112471 18117672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01893 - - gmx:100794569 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01893 6 18112471 18117672 Spst8g00991 8 8626575 8629151 PCT