Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01892 ATGGGTAGCACCAGCAATGCCTCTTCTTCAGATTTATTCTTCCGCCGCCATGTGTTCCTGTGCTACAAGAACCCCGCAGTGTGGCCTCCGCGCATTGAGGCTGCCGAGTTTGATCGATTGCCCAGGTTGCTTCACGCGGCCATCAATGCAAGGAAGCCGCATATTAAGAAAGAGACCTGCTTAACAATATGTGAGGGGCATGATGGGACTGAAACATCAAATGGGGATGCATTAATCTTTCCCGACATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTCTTGTCAAGGAGGGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGCTTCATATGTATTTGTGTGTTCTCATGGTTCCCGCGATAGAAGATGTGGGGTTTTTGGGCCTGTCCTGGTCAGTAGATTCAGGGAAGAGATAGGGTTACATGGACTCCAAGGCAAAGTGCTGATTAGCTCGTGCTCGCACATTGGGGGGAGTAAGTATGCCGGAAATGTTATTATATTCGGATCGAGCATCAACCGAGAAGTCACTGGCCACTTGTATGGATATGTTACTCCGGATGATGTGCCTTTATTGTTTCGCCAGCATATCATTGCAGGGGAGATTTTTGACTCACTATGGAGGGGTCAAATAGGTTTATCAGAAGATGAACAGAAGAAAAAGCAAGAACAAAGGCTTCAGGTGAACGGTGCAAGAAATTTAGAAGGAAGCACGGTTGCAAGCCGGTGTCAAACAGATGGGGAGAGCTGTTGCCAGGACAATGAAGACTCTTGTTGCTGTCAGAATGATGTATTAGAGGAAAGGAGAGAGCTTTCAGCTAATAAGAACAGGGAGAATCTGAATGTGCTTTGTCGGATGAACAAGGGCAAAGGAGTGTCAGGCAAATTTAGTTCCATGCCGACGTGGCTTGATAGCTGGGAGCAAGAGGATACCTATGCTGCTCTTGCTGTTGTTTGTGCTGCTGTGTCGGTAGCCATAGCCTATAGCTGCTACAAACAGATGAGATGA 1035 0.4628 MGSTSNASSSDLFFRRHVFLCYKNPAVWPPRIEAAEFDRLPRLLHAAINARKPHIKKETCLTICEGHDGTETSNGDALIFPDMIRYRRLTHFDVETFVEEVLVKEGEWLPGNPESLKASYVFVCSHGSRDRRCGVFGPVLVSRFREEIGLHGLQGKVLISSCSHIGGSKYAGNVIIFGSSINREVTGHLYGYVTPDDVPLLFRQHIIAGEIFDSLWRGQIGLSEDEQKKKQEQRLQVNGARNLEGSTVASRCQTDGESCCQDNEDSCCCQNDVLEERRELSANKNRENLNVLCRMNKGKGVSGKFSSMPTWLDSWEQEDTYAALAVVCAAVSVAIAYSCYKQMR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01892 344 FunFam APD1p protein 118 217 - -
Spst6g01892 344 Pfam Sucrase/ferredoxin-like 15 218 IPR009737 -
Spst6g01892 344 SUPERFAMILY Thioredoxin-like 120 222 IPR036249 -
Spst6g01892 344 Gene3D Glutaredoxin 118 218 - -
Spst6g01892 344 CDD TRX_Fd_Sucrase 119 220 IPR009737 -
Spst6g01892 344 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 13 331 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01892 Spst-Chr6 18107248 18110450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01892 - - vun:114187290 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01892 6 18107248 18110450 Spst6g01892 6 18107248 18110450 ECH
Spst6g01892 6 18107248 18110450 Spst8g00992 8 8637488 8640253 PCT