Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01543 ATGGCTCTAAGATATTTGTGCACTACAAATGTTTCGACCAGACATCATGCGTCTTCTGGTAAAACTCTTGTTCCATCTTCTCTCTCTCTAACAAACTCACGCATGCACAGTTCCACCTCAGAGACAGACACCAAGAACAAGTCCACTGCGGACATCGTGAAGAGCCTCGTCAACACCCTCGTGCTTCCTTCCATCTCATCTACTCCACTCCACTCTCTCCACAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTGCATATCAGAAATCTCAGCCTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCTGCTGATGCATCGGTTGTTAGTGCTGTGAATGAAGGAATTGAAGCTGCAAGAGATATTGTATGCCTTAGAAGGCCGTGGGTGATGATCAGTGTCAATGATGATAAAGATCTTCATTTTCGGAAGGCCGAATTTGATCCAGAAGACTGTCCAGCAGACTGTTCCCGGCCTTGTGAAAATGTGTGCCCTGCTAATGCAATATCATTCCAAGGGAAACCAACTTTGGGAATTTCATATAATACCGAAGCATCAGTTGATGGAGTCATAACAGAACGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATAAGAGAGGTAGCATATGTAAGAGATGCTATTACAACTGCAGATCTCATCAAGAGAAAAGACGTTGATGCTATGGAGATACATACAAGTGGGAGACAGAGTACTTTATTCGAACAACTCTGGAATGCTCTGGGAGATTCAGTAGGAAATTTGAAGCTTATAGCAGTTAGCTTACCTAATGGTGGTGATTCAACAATATCCTCCATGAACAATATGTTCTCTATTATGAAACCCAATCTTCAAAGCTTCAACTTGTGGCAGCTAGATGGTCGTCCTATGAGTGGAGACATTGGGAGAGGAGCAACTAAGGAATCGATTGCCTTTGCTGTTCAAGTGACCAAAGCAAAAGAAAGACCTCCTGGTTTTCTTCAACTTGCTGGTGGAACCAATGCTCACACAATTGAAGGGTTGAAAAAAGAAGGACTCTTTCAAACAACTATTACTGAATACTTGCATGATGATAACTCAGCAATAAGCCCATCTGATTCACCACATGCTTTAATTAGCGGCATAGCATATGGTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGACATCCATGCAATCACAGCATGGTGGAGCTGCATCGGTTGAGGATCATTCTGAGTATCTCTTGATGGCTCTTAAGGAAGCACTGGCTTTGGTGGGGCCTGTTAAATGTCTATGA 1320 0.4379 MALRYLCTTNVSTRHHASSGKTLVPSSLSLTNSRMHSSTSETDTKNKSTADIVKSLVNTLVLPSISSTPLHSLHRGNWVKLICGASFEDVVHIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDIVCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAISFQGKPTLGISYNTEASVDGVITERCYGCGRCLPVCPYDKIREVAYVRDAITTADLIKRKDVDAMEIHTSGRQSTLFEQLWNALGDSVGNLKLIAVSLPNGGDSTISSMNNMFSIMKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQVTKAKERPPGFLQLAGGTNAHTIEGLKKEGLFQTTITEYLHDDNSAISPSDSPHALISGIAYGGYARKIVGRVLTSMQSQHGGAASVEDHSEYLLMALKEALALVGPVKCL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01543 439 Pfam 4Fe-4S dicluster domain 163 216 IPR017896 -
Spst6g01543 439 Gene3D - 156 231 - -
Spst6g01543 439 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 151 182 IPR017896 -
Spst6g01543 439 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 73 232 - -
Spst6g01543 439 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 203 214 IPR017900 -
Spst6g01543 439 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 193 223 IPR017896 -
Spst6g01543 439 MobiDBLite consensus disorder prediction 17 46 - -
Spst6g01543 439 SUPERFAMILY 4Fe-4S ferredoxins 131 221 - -
Spst6g01543 439 Pfam Iron-Sulfur binding protein C terminal 233 434 IPR021039 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01543 - - gmx:100804088 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01543 6 14487315 14490932 Spst6g01543 6 14487315 14490932 ECH