Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01514 ATGGAGGCAAAGTCACTGCTTCAAGGTTCTTCTCTTGCACCTTCTTATCCCCTCTCTAAGCATTCGAAAACCACCATGATGACGGCCAACTGCGTTAGATTCAAGTTCAACCACAATCCATGCCTCATATTCGCGAATGGGTACCCTACTTCTTCTTCTTTGCTTCCACTTTCTATTCACAATAAGCCCAGAAAATCAGCATCAGTGATTGTAAGTGCCCGCAAGAAAGACAAGAAAGATGATACCCATAGCTCCGTACCCAAACCTGACGAGGCCACGGGTTTCTTCCCCGAAGCTGTGCTCCTTAAAAAGAGAACAGTTGAGGAAGAAGGGAAGCTTCTCCCGGAGTTTGAAGACGAAGAGGAAAGAGAACTCTTTGAATCGCTGATGCTTGAGCTGGAAAGTGATATGAATACTGAAATATTGCGCCACTATGAGGTTATGTACTTAATTCACGAGAAGCATGAAGATGAGGTTGCAGCTGTCAACGAGAAAATTCAAGACTTTATGAGGGAGAAGAAAGGCCAGGTTTGGAGGCTGAATGATTGGGGTATGAGAAGGCTAGCTTACAAAATAAAGAAAGCTAAAAAAGCCCACTACATGTTGATGAACTTCGAGTTGGATGCAAAATATATCAATGATTTCAAGACTTTGTTGGACCAAGATGAAAGAGTTATTCGGCATCTTGTGATAAAGAGAGACGAGGCAATCACTGAAGATTGCCCTCCTCCTCCGGAGTTTCATACTTTACGTGCAAATGCAGATGATATCGACGACGACGATGAAGAATTTGATGATGACTGGGATGGTGAAGATGAGGATGATGATGATGGTATTATTTTTGTAGATGATGATGATGATGATGTCATGGATTCAAGAAATGAGACATCAGCAAATGTTAGAGAAGCAGAAGAAATAAGAGAGTTGAGGGCTGAAAATGTAGGTAGGTAA 951 0.4217 MEAKSLLQGSSLAPSYPLSKHSKTTMMTANCVRFKFNHNPCLIFANGYPTSSSLLPLSIHNKPRKSASVIVSARKKDKKDDTHSSVPKPDEATGFFPEAVLLKKRTVEEEGKLLPEFEDEEERELFESLMLELESDMNTEILRHYEVMYLIHEKHEDEVAAVNEKIQDFMREKKGQVWRLNDWGMRRLAYKIKKAKKAHYMLMNFELDAKYINDFKTLLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRANADDIDDDDEEFDDDWDGEDEDDDDGIIFVDDDDDDVMDSRNETSANVREAEEIRELRAENVGR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01514 316 MobiDBLite consensus disorder prediction 238 301 - -
Spst6g01514 316 FunFam 30S ribosomal protein S6 142 236 - -
Spst6g01514 316 MobiDBLite consensus disorder prediction 256 291 - -
Spst6g01514 316 Gene3D - 142 240 IPR014717 -
Spst6g01514 316 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 138 253 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst6g01514 316 MobiDBLite consensus disorder prediction 72 87 - -
Spst6g01514 316 Coils Coil 152 172 - -
Spst6g01514 316 MobiDBLite consensus disorder prediction 72 92 - -
Spst6g01514 316 NCBIfam 30S ribosomal protein S6 143 234 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst6g01514 316 CDD bS6 144 233 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst6g01514 316 Hamap 30S ribosomal protein S6 [rpsF]. 142 235 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst6g01514 316 Pfam Ribosomal protein S6 144 232 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst6g01514 316 SUPERFAMILY Ribosomal protein S6 142 242 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst6g01514 316 ProSitePatterns Ribosomal protein S6 signature. 184 193 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01514 - - gmx:100790128 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01514 6 14202472 14205301 Spst6g01514 6 14202472 14205301 ECH