Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01513 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCATGGATTGAACCACAGAAAAGGGGTTTCTGGTGGTGTGCTTCCGGGAATGAAAGGCCATGGTAAAGGAGGGCCGGTTAAGGTTTTCCCGAGAGAGGAACTTGCAGACGGCGATAGTGGTGTTTCGCGGACTGCATGTGATGCTAGTTCTTCAGGTGATGACTTTAACGATGAGCTCATATCTGAAAATATTTATAGTAAAGATAAGCAAGGGATGGCTGGAAAGCATGACCTGGAGGAGTCCTTGCCCTTTGAGAGAAATTATGGGGATGACAGTTTTAATTCTGAAGCTTCAGTACAAAAAGAAAATGGGACTTTACCTAGAAGTGATCAAGGTTATCAGAGTATAAAGAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAAAAGTGTGGTGGATAAAGCAGACCTTGCCGATAATGTGATAATTAGGAGATTGAGGTTTTCAGCGTTTTCCATGTTTACAGCAATTTCAGAGTGGCTAACCCGGCAGGCTCCATTGTTTGTATCTCTTAAAACCATCATGTTTAAAGTGTATCATAATTCCAGAACGAAAGTTGTGCAGGCATATCCTGTTATTCTGAAGTTGCTCATGCATTTTGGAAATGTAATGCTCCTATTATCAGTATTTTGGTTGGACTGTGCGCTTCGAGGTATTGATTCATTTGTACGAATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTAGCATATTCTCCGTGATTAGTATGATTGGGATGCTTAAGTTTCTTGCTGTCCTGGGCCTGGCTGCCTTGATTGGATTTTTTCTTGGATTCATGCTTGCAATTTTGGTAGTTGCAATTATTGGAGTTGTTACCTTGTGGTTTTATGGTAGCTTTTGGACAACAGCACTTTTCATCATCCTAGGAGGATTGGCATTTATGTTTAGTCATGAACGGGTGGCACTGCTTATCACCACAGTGTATTCTGTTTACTGTGCATGGCTGTATGTTGGGTGGCTTGGTTTGCTATTGGCTTTCAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCTAATCATTTTGAGCATAGATCTGGAATGCATGGCCAACCAGGATTTAGTGATGGATCAACACATGCTTCTTCCTCTGAAAATGGACCTGGACCATATGTAGATCGCAATACTGGCATCCCCTCAACTAGTGGGGTTGATTCTGATTTAACATCTGAAGATGAGGTTGTCCGTTTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTCACTCGGTATCAAAGTATAGATGTTTCAATACTTAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAGAAGGCTGCTGAAGCATTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGACTCCTTGAAGCGAAAAGCTTACGATGATGAGCTACGGAGAGAGGAGCTTTTGAGTGTATTTCGTAGATTTCATGATGCTTCTCGTAAGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCACGGTCTGATGCAGATGGCAAAGACCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTGGCGGTTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCGAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCGTTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCAGCATATGTGTGTGCTGGTAGCAGGATATACGATGCCACGGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCTAATACTCATAAGCCAAGTTTTCATGTTAACGCCAGTTTAATGTCCAAGAATAATTCTGGCAAAGGAACTAGTTCAGGTCAAAGAGGTGGGCGGATGCCAACACCTAATATCGAAGAATCCATGACTGAGGAAGAATTCTTTGAGTGGTTACAGAATGCAGTACAGGCAGGTGTGTTTGACAATTTTAATGGCACTGCACCAGAGAGCCCATCTCCCAAACCTGGAAATGGGATGAAAAGTCCTGGCAGTAGCAGTGGTGCTGGTGCTAGTGCGAGTGGCAGTAGCACCAAGAGAAAGAAAAAGGGGAAAAAGCAATGGTGA 2220 0.4275 MARKGNQQKNGVDRHGLNHRKGVSGGVLPGMKGHGKGGPVKVFPREELADGDSGVSRTACDASSSGDDFNDELISENIYSKDKQGMAGKHDLEESLPFERNYGDDSFNSEASVQKENGTLPRSDQGYQSIKSRLSCILDSLHLKSVVDKADLADNVIIRRLRFSAFSMFTAISEWLTRQAPLFVSLKTIMFKVYHNSRTKVVQAYPVILKLLMHFGNVMLLLSVFWLDCALRGIDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLAVLGLAALIGFFLGFMLAILVVAIIGVVTLWFYGSFWTTALFIILGGLAFMFSHERVALLITTVYSVYCAWLYVGWLGLLLAFNLAFISSDVLIYFLKKNIDQQSRSNHFEHRSGMHGQPGFSDGSTHASSSENGPGPYVDRNTGIPSTSGVDSDLTSEDEVVRLLNCSDHYAALGFTRYQSIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDASRKNGRHGFFPSGFARSDADGKDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNASLMSKNNSGKGTSSGQRGGRMPTPNIEESMTEEEFFEWLQNAVQAGVFDNFNGTAPESPSPKPGNGMKSPGSSSGAGASASGSSTKRKKKGKKQW 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01513 739 MobiDBLite consensus disorder prediction 645 669 - -
Spst6g01513 739 MobiDBLite consensus disorder prediction 693 739 - -
Spst6g01513 739 CDD DnaJ 436 492 IPR001623 -
Spst6g01513 739 Pfam Cleavage inducing molecular chaperone 546 643 IPR032843 -
Spst6g01513 739 ProSiteProfiles dnaJ domain profile. 436 503 IPR001623 -
Spst6g01513 739 MobiDBLite consensus disorder prediction 386 421 - -
Spst6g01513 739 SMART dnaj_3 435 495 IPR001623 -
Spst6g01513 739 PANTHER OS03G0832900 PROTEIN 1 739 - -
Spst6g01513 739 MobiDBLite consensus disorder prediction 693 728 - -
Spst6g01513 739 ProSitePatterns Nt-dnaJ domain signature. 480 499 IPR018253 -
Spst6g01513 739 MobiDBLite consensus disorder prediction 1 68 - -
Spst6g01513 739 MobiDBLite consensus disorder prediction 105 125 - -
Spst6g01513 739 Gene3D DnaJ domain 425 514 IPR036869 -
Spst6g01513 739 SUPERFAMILY Chaperone J-domain 431 518 IPR036869 -
Spst6g01513 739 PRINTS DnaJ domain signature 458 473 IPR001623 -
Spst6g01513 739 PRINTS DnaJ domain signature 475 495 IPR001623 -
Spst6g01513 739 MobiDBLite consensus disorder prediction 645 664 - -
Spst6g01513 739 Pfam DnaJ domain 436 500 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01513 Spst-Chr6 14195938 14200719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01513 1 703 Miscellaneous Gene Families AT5G49580 52.186 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01513 K09534 - gmx:100789594 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01513 6 14195938 14200719 Spst6g01513 6 14195938 14200719 ECH