Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01512 ATGGATATGCGAGGAGCTGGGATTTTCCCGGATGAGGTGGTTATTCAGATTCTTGCAAGGTTGCCTGTGAAGTCCATTTTTAGGTTCAAAACCGTGTGCAAACTGTGGAATAGGATGTCTTTGGATAAGTATTTCGTTCAATTATACAATGAGGTGTCTAGGAAGAACCCCATGATTCTGGTCGAGGTTTCAGATTCGTCTGAGTCCAAATCTAGCTTAATATGTGTGGATAATTTGAGGGGTGTGTCTGAATTTTCACTGAATTTCTTGAATGATAGAGTTAAGGTTCGAGCATCTTGTAATGGGATGCTGTGCTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTCTGCAATCCGGTCACTCGCGAATACCGGTTGCTTCCCAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCGGATGGCGAGGCTACCTTGGTTGGCTTGGCCTGTGATTCGGCGTATCAGAAGTTCAATGTTGTTCTAGCAGGCTACCATCGCACTTTTGGTCATAGGCCGGATGGGAGTTTCATATGTTTGGTGTTTGATTCTGAGTTGAACAAGTGGAGGAAGTTTGTTTCATTACAAGATGACCATTTCACTCATATGAATAAAAACCAGGTTGTTTTTGTCAATAATGCTCTACACTGGTTGACAGTTAGCTCTACATATATACTTGTGCTTGATTTAAGTTGTGACGTTTGGAAGAAGATGCAGCTACCCTATGACTTGATTTATGGAAATGGTTATAGGATTTATCTCTTAGACTTTGATGGCTGCTTGTCTGTTATTAAAATTTCAGAAGCATGGATGAATATATGGGTGTTAAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGGGGAATGGTGCCAGGTATTTTCCCGATCAGTCAAACCGGTGAATATGTTTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATCGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTCAAGTATAGTTCAGCACTCCCATTATGGTTTTCTGCTCATGCATATCGCAGCACAATGTTCTCATGTAACTGA 1083 0.4127 MDMRGAGIFPDEVVIQILARLPVKSIFRFKTVCKLWNRMSLDKYFVQLYNEVSRKNPMILVEVSDSSESKSSLICVDNLRGVSEFSLNFLNDRVKVRASCNGMLCCSSIPDKGVFYVCNPVTREYRLLPKSRERPVTRFYPDGEATLVGLACDSAYQKFNVVLAGYHRTFGHRPDGSFICLVFDSELNKWRKFVSLQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDVWKKMQLPYDLIYGNGYRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHKQILVYHRKSQVWKEMYSVKYSSALPLWFSAHAYRSTMFSCN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01512 360 NCBIfam F-box protein interaction domain 99 325 IPR017451 -
Spst6g01512 360 SMART fbox_2 9 49 IPR001810 GO:0005515
Spst6g01512 360 CDD F-box_AtFBW1-like 9 45 - -
Spst6g01512 360 Pfam F-box domain 10 44 IPR001810 GO:0005515
Spst6g01512 360 PANTHER BNACNNG10540D PROTEIN 9 338 - -
Spst6g01512 360 ProSiteProfiles F-box domain profile. 3 52 IPR001810 GO:0005515
Spst6g01512 360 SUPERFAMILY F-box domain 7 78 IPR036047 GO:0005515
Spst6g01512 360 Gene3D - 9 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01512 Spst-Chr6 14190664 14191746 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01512 - - gmx:100811223 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01512 6 14190664 14191746 Spst6g01512 6 14190664 14191746 ECH