Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01499 ATGGTGAAGGTTCGCATGAACACCGCCGATGTTGCTGCGGAGGTCAAATGCCTCCGACGCCTCATCGGAATGCGCTGCTCCAACGTCTACGATCTCACTCCCAAGACCTACGTGTTCAAGCTCATGAACAGCAGTGGAGTTTCGGAATCCGGGGAGAGCGAGAAGGTTCTGCTGCTCATGGAGAGTGGCGTCAGATTGCACTCTACTATCTACATGCGTGACAAGAGTAACACGCCTTCCGGTTTCACTCTCAAATTGAGGAAGCACATTCGTACGAGGAAGCTCGAGGATGTGCGCCAACTTGGGTACGATCGGATTATTCTCTTTCAATTTGGACTTGGAGAGAATGCAAACTATGTTATATTGGAGCTGTATGCTCAGGGGAATATCCTCCTCACAGATTGTAATTTTACCGTCATGACTCTGCTGCGGTCGCACAGGGATGATGATAAAGGGCTTGCAATTATGTCGCGTCATCGATATCCTGTGGAAAGTTGTCGAGTTTTTGAGCGAACTACTATTGAAAAGTTGCGGGCATCTCTAGTGTCTTCCAAGGAAGATGAAAATGATGAGGCTGTTAAGGTCAATGGAAACGGAAGTACTGGTTCCAATGTAGCAAAAGAGAAGCAGGGAACCCAGAAAGGTGTGAAGCCATCAACACTGAAAACTGTGCTTGGGGAGGCGCTTGGTTATGGACCTGCACTTTCTGAACATATAATATTAGATGCTGGCCTTATTCCCAGTACAAAAGTTCTCAAAGATAAAACGTGGGATGATGTTACTGTTCAGGCTTTGGTCCAAGCTGTTGTGAAGTTTGAAGATTGGATGCAGGATATTATTTCAGGTGAAGTAGTCCCTGAAGGATACATTTTGATGCAGAACAAAAATTTGGGGAAGGATTCTTCCATATCTCCGCCAGGAAGTGTCAGCCAGATGTATGATGAGTTTTGCCCCATCTTACTCAACCAGTTTAAATCAAGGGATTATACAAAGTTTGAGACATTTGATGCAGCCTTGGATGAGTTCTACAGCAAAATTGAGAGTCAAAGAGCTGAACATCAGCAGAAAGCCAAAGAAAATTCAGCTACTCAGAAACTTAATAAGATTCGGCAGGATCAGGTTGATCCTCATATGGTGTCAAAACTCTTAATGAACGTAAAACACGAGGATGTGAAAAGTGTATTCTACAAGACTGCAATTTCTCTTCCAAAAGGTTTAATAGTTGTATCCTCTGAAGCCCATTATACTATTGAACATGATGGAAATGGTGGCTGCAATTGTGTCTTTACCATGCAGATGTATGTTTTGAGTACTGGTTGCAATCTACAAATTAAAGAAAATCGTGTACATGCTTTGAGGAAAGAAGCTGATCAATGTGTTAAGATGGCAGAATTGATAGAATACAACTTGGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAAGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCGGTAGCTGGTCTCATTGACAAGCTCCATCTTGAGAGGAACTGCATGACTTTATTGTTAAGCAATAATCTCGATGAGATGGATGATGATGAAAAGACACTCCCTGTCGATAAGGTTGAAGTTGATTTAGCTCTTTCAGCACATGCTAATGCTCGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGAAAAAACTGTAACTGCCCATGAAAAGGCTTTTAAAGCTGCAGAAAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCACAATTTCACATATGCGCAAAGTCCACTGGTTTGAGAAATTTAATTGGTTTATTACAAGTGAGAACTATTTGGTTATCAGCGGGCGTGATGCACAGCAAAATGAGCTGATAGTGAAGCGGTATATGTCAAAAGGAGACGTATATGTACATGCTGATCTGCATGGAGCTTCTAGCACAGTTATCAAGAATCACAAGCCTGTGCAGCCAATTCCACCACTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACAAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACGGCTCCTACTGGTGAATATCTCACAGTGGGGAGTTTCATGATCCGGGGAAAGAAGAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGCCTGCTATTTCGCTTGGACGAGAGTTCCTTAGGATCACATTTAAATGAAAGAAGAGTAAGAGGAGAGGAGGAAGTAGCAGATGATTATGAAGAAACTGCTCCTCTTGTAGACAAATCTGATTCGGAGTCTGAGAAGGATGTAACTGATATAAATTCTACCATTGACTCAGAAAGGAATGGTGAACTATCAGCAGATTCACACAAACCCCTATCAGAAAACTTGCCTACCGATTCATCTCAAACTAGTTTGGCCACTATCAATGCCAAAAAGCCAATTTCACATGATTTTCCTGTGAAAGAGACAAGTACATCAAATATGGTTGATAGGGAGATATTATCAGACATTAGTGGAGATGGCTTAGTGACTGTCACCCCTCAACTAGAGGAACTTATTGACCAAGCTCTGGAACTTGGATCTGTTGCTAAATCAAGTAAACATCATGGTACTGAGAACTCTCAAATTGATTTAGGCAGTGAGAAACATTTTCAACCAAGCAAAGCTGCAGTTAGGGATAAACCTTATATATCAAAAGCTGAGAGACGAAAGCTTAAAAAAGAACCAAAACATGAAGCAGATTCAAATGTTGAGCATGAAAATGAAGAATCAAAACTGGAAGATATTTCTGCAAATCTACCTGCCAAAGAAGATCAAAATGTGAAAAAAGCTGGTGGTCAGAAAATCAGCCGTGGGCAGAAGGGTAAACTTAAAAAGATAAAGGAGAAGTATGCGAACCAGGACGAGGAAGAAAGGAGCATCCGAATGGCATTGTTGGCTTCTTCTGGAAAATCAATCAAGAAGGAAGAGACGTCATCTGAAAATGATGCATTGGACAAAGGGAAAATCCCTGACAACGGTCTTGTTGAAGCTTCAAAAATATGTTACAAGTGTAAGAAGGCAGGTCACTTATCACGGGATTGTAAGGAGCAATCAGATGATCTGGTGCACAGGCATGCAATTGCTGAAGCTGAAGAAAACCCCAAAATGACTGATCTTGACACTTCCCAAGCAGACAGGGTGACAATGGAAGAAGATGATATTCATGAAATAGGAGAAGAAGAGAAAGAAAAACTGAATGACGTGGATTACTTGACAGGGAATCCACTTCCTAATGACATTCTCTTGTACGCTGTTCCTGTCTGTGGTCCTTACAGTGCACTGCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGCCCAGCGAAGAAAGGGAAAGCTGCAAAAACTGCAGTGAACTTGTTCAGCCATATGTCAGAAGCAACAAACCGGGAAAAGGAGTTGATGAAAGCCTGTACAGATCCTGAGCTAGTTGCTGCAATTATTGGTAATGTGAAAATATCAGCAGCCGGCCTTACTCAATTGAAGCAAAAACAAAAGAAAGGCAAGAAGAGCAGCAAACAAGCGAGTTAA 3621 0.4214 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLTPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHSTIYMRDKSNTPSGFTLKLRKHIRTRKLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDCNFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLRASLVSSKEDENDEAVKVNGNGSTGSNVAKEKQGTQKGVKPSTLKTVLGEALGYGPALSEHIILDAGLIPSTKVLKDKTWDDVTVQALVQAVVKFEDWMQDIISGEVVPEGYILMQNKNLGKDSSISPPGSVSQMYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRAEHQQKAKENSATQKLNKIRQDQVDPHMVSKLLMNVKHEDVKSVFYKTAISLPKGLIVVSSEAHYTIEHDGNGGCNCVFTMQMYVLSTGCNLQIKENRVHALRKEADQCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRLQLNQEKTVATISHMRKVHWFEKFNWFITSENYLVISGRDAQQNELIVKRYMSKGDVYVHADLHGASSTVIKNHKPVQPIPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEVADDYEETAPLVDKSDSESEKDVTDINSTIDSERNGELSADSHKPLSENLPTDSSQTSLATINAKKPISHDFPVKETSTSNMVDREILSDISGDGLVTVTPQLEELIDQALELGSVAKSSKHHGTENSQIDLGSEKHFQPSKAAVRDKPYISKAERRKLKKEPKHEADSNVEHENEESKLEDISANLPAKEDQNVKKAGGQKISRGQKGKLKKIKEKYANQDEEERSIRMALLASSGKSIKKEETSSENDALDKGKIPDNGLVEASKICYKCKKAGHLSRDCKEQSDDLVHRHAIAEAEENPKMTDLDTSQADRVTMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYSALQSYKYRVKIIPGPAKKGKAAKTAVNLFSHMSEATNREKELMKACTDPELVAAIIGNVKISAAGLTQLKQKQKKGKKSSKQAS 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01499 1206 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 445 1182 - -
Spst6g01499 1206 MobiDBLite consensus disorder prediction 902 948 - -
Spst6g01499 1206 Pfam Zinc knuckle 1030 1046 IPR001878 GO:0003676|GO:0008270
Spst6g01499 1206 SMART c2hcfinal6 1030 1046 IPR001878 GO:0003676|GO:0008270
Spst6g01499 1206 MobiDBLite consensus disorder prediction 756 821 - -
Spst6g01499 1206 Pfam NFACT N-terminal and middle domains 10 161 - -
Spst6g01499 1206 Pfam NFACT protein C-terminal domain 1091 1184 IPR021846 -
Spst6g01499 1206 Gene3D - 1025 1078 - -
Spst6g01499 1206 Coils Coil 935 955 - -
Spst6g01499 1206 Pfam NFACT protein RNA binding domain 612 723 IPR008532 -
Spst6g01499 1206 SUPERFAMILY Retrovirus zinc finger-like domains 1028 1049 IPR036875 GO:0003676|GO:0008270
Spst6g01499 1206 MobiDBLite consensus disorder prediction 756 790 - -
Spst6g01499 1206 MobiDBLite consensus disorder prediction 880 980 - -
Spst6g01499 1206 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Spst6g01499 1206 ProSiteProfiles Zinc finger CCHC-type profile. 1031 1046 IPR001878 GO:0003676|GO:0008270
Spst6g01499 1206 FunFam nuclear export mediator factor Nemf 6 163 - -
Spst6g01499 1206 MobiDBLite consensus disorder prediction 807 821 - -
Spst6g01499 1206 MobiDBLite consensus disorder prediction 188 217 - -
Spst6g01499 1206 MobiDBLite consensus disorder prediction 194 217 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01499 K24971 - gmx:100803745 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01499 6 14056002 14066846 Spst6g01499 6 14056002 14066846 ECH