Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01239 ATGTTCGATGTGTATAGGTATCACATTAATTTCTATAAACAAGTTGTCAAAAGGATTTGTGATTGCAAGATTGCAAGAAACATTTGTGAGCTGTTCATTGCTCTGATTAAAGACCAAATCCATAAAAACCTCCACGCCTTCACACACCATTCTTTACTTTCCACTCTTCACGCCCCTGGGCCCTGCCTTGCATGCCTAGATTTCAATTCCAAGGCCATGGAAGATGAAAGAGGGAGTTTCCTGGCAAAGAACAAGGAGGAGCACTTAGCACTTGATGGAACAACAGAATTGAAGATCTTCAGATCATACCTTAGATGGGTTTACGTAGATCACTCCAACTTTTTCAAAGCTGGTTTCTCTTGGTCCGTGTTCTTCACCTTGGCCTTTGTAGTGCCCATACTTTCACACTTGCTACTTGATTGTCCCACCTGCGACCAAGACCATAGTCGACCGTACCACATACCAGTGCAGATTTCTCTCTCCATCTTCGCTTCCCTCTCTTTCATCAGTATTTCTTCGTGGGATCGTAAATATGGCCTCGGCAAGTTTCTCTTCCTTGATAAATTAGGTGATGAAAGCCTCAAGATTCAACGGGGGTACTCAGAACAGATGCAGGGAACCATGAAGCTCATATTGCAGTGGGGGCTTCCCTGTTTTATAGCAGAATGTGCCTACAAGATATGGTGGTACGTCTCAGGAGCATCACAAATACCACATTATGGTAATATATACGTGAGCAGCATCATTCTGTGCACATTGGAGCTATGTTCTTGGCTTTATAGAACCTCCATTTTCTTCCTGGTGTGTGTTCTCTTTCGACTTATCTGCTACTTGCAAATACTCAGGCTAGATGAGTTTGCTCGAGTTTTTCATCGAGAAACTGAGGTGGGATCAATCTTGCTGGAGCACCTGAAAATGAGAAGGAATCTTCGGATCATAAGCCATCGTTTCCGAAGTTTCATTCTATCTTCTCTGCTTTTGGTGACAGCAAGCCAACTCATTTCTCTGCTAATGGTTACAAAACCCCATGCTGATGTTGATATCCTCAAGGCTGGAGAGCTTGCGCAAATAGAATGTAATAGTTTGGGTTCAATGTTACAGTTGGTGTCCATCACCCTGGTGAGTGGACTTTTCTTACTCTTGCGAGGCGCAACCAAGATCACACATAAAGCACACTCCGTTACAGGCCTTGCAGCTAAGTGGCATATATGTGCTACCATAAACTCATTTGACAACATTGAAGGAGAGACGCCAACAACTGCACATGCAATTTCAGCCCAAGCTATTGCTGCCAATATTAGTTGGGGATCATCCGATGATGAGGTAGGAGATGAGGAAGATGAGTTGGATAACACCAAATTGGTGCCAATTTACACCCAAACTATCTCATTCCACAAGAGGCAGGCTCTAGGTAAGTGA 1419 0.4362 MFDVYRYHINFYKQVVKRICDCKIARNICELFIALIKDQIHKNLHAFTHHSLLSTLHAPGPCLACLDFNSKAMEDERGSFLAKNKEEHLALDGTTELKIFRSYLRWVYVDHSNFFKAGFSWSVFFTLAFVVPILSHLLLDCPTCDQDHSRPYHIPVQISLSIFASLSFISISSWDRKYGLGKFLFLDKLGDESLKIQRGYSEQMQGTMKLILQWGLPCFIAECAYKIWWYVSGASQIPHYGNIYVSSIILCTLELCSWLYRTSIFFLVCVLFRLICYLQILRLDEFARVFHRETEVGSILLEHLKMRRNLRIISHRFRSFILSSLLLVTASQLISLLMVTKPHADVDILKAGELAQIECNSLGSMLQLVSITLVSGLFLLLRGATKITHKAHSVTGLAAKWHICATINSFDNIEGETPTTAHAISAQAIAANISWGSSDDEVGDEEDELDNTKLVPIYTQTISFHKRQALGK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01239 472 Pfam Protein of unknown function (DUF3537) 96 470 IPR021924 -
Spst6g01239 472 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 82 470 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01239 Spst-Chr6 11445280 11448491 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01239 - - gmx:100809035 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01239 6 11445280 11448491 Spst6g01239 6 11445280 11448491 ECH