Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01214 ATGGCATCGTCAGCAGCGCCGTCGCTGAACGCGGTGCTGGACCGGGTCCGGGGGGCCACTGAGCGCTCCGGCCGGAATGTGCAAGAGATTCGTGTTGTGGCGGCGAGCAAGACCAAGTCAGTTTCTGCTCTCCGTGAGGTCTACGACGCCGGCCATAGATTCTTCGGCGAGAACTACGTTCAGGAACTCCTTCAAAAAGCTCCTCAGCTTCCCGATAACATCGAGTGGCATCTCATCGGCAATTTGCAGAGCAACAAAGTCAAGCCTCTTATCGCTGGTGTTCCCAACCTTGCTTGTGTAGAAACCGTGGACGATGAGAAGATAGCAAATCTTCTTGATCGTGCTGTAGCAAATGTTGGCAGGAAACCATTGAAGGTTTTTGTTCAAGTAAATACAAGCGGAGAAACTTCTAAATTTGGTGTTGAACCAGCTCTGTGTGTGGATCTTGTAAAACACATCTCAACCTGCTCAAACCTTGAGTTTTCTGGTCTAATGACAATTGGCATGCTGGATTATTCATCCACCCCAGAAAATTTTCAGATGTTATCCAATTGCAGAAGTGAAGTTTGTAAAGCACTTGGAATATCAGAAAAGCAATGTGAGCTGTCTATGGGCATGACTGGAGACTTTGAGCAAGCTATTGAGATGGGAAGTACAAATGTTAGGATTGGAACTGCCATATTTGGAGCCAGAGAATATCCATCGAAAGAGAAGTAG 717 0.4714 MASSAAPSLNAVLDRVRGATERSGRNVQEIRVVAASKTKSVSALREVYDAGHRFFGENYVQELLQKAPQLPDNIEWHLIGNLQSNKVKPLIAGVPNLACVETVDDEKIANLLDRAVANVGRKPLKVFVQVNTSGETSKFGVEPALCVDLVKHISTCSNLEFSGLMTIGMLDYSSTPENFQMLSNCRSEVCKALGISEKQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYPSKEK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01214 238 Gene3D Alanine racemase 1 238 IPR029066 -
Spst6g01214 238 FunFam Pyridoxal phosphate homeostasis protein 1 238 - -
Spst6g01214 238 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 4 236 IPR011078 GO:0030170
Spst6g01214 238 Pfam Alanine racemase, N-terminal domain 13 231 IPR001608 -
Spst6g01214 238 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 8 231 IPR011078 GO:0030170
Spst6g01214 238 CDD PLPDE_III_YBL036c_euk 9 229 - -
Spst6g01214 238 Hamap Pyridoxal phosphate homeostasis protein. 7 230 IPR011078 GO:0030170
Spst6g01214 238 PIRSF YBL036c_PLPDEIII 2 237 IPR011078 GO:0030170
Spst6g01214 238 SUPERFAMILY PLP-binding barrel 5 229 IPR029066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01214 Spst-Chr6 11119479 11121884 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01214 K06997 - gmx:100527295 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01214 6 11119479 11121884 Spst6g01214 6 11119479 11121884 ECH