Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01200 ATGTCTTCCTTACATGTTTCGGTCCTTAATAAACCTTTACATTCTTCTTCGTGTTCTTCTTCTATGAAGAGAACCAATTGTTCTATCAATGTCCCTAAACTACCTCGAGTCTCCTTGTCAGTTCCGAAAGTGCTAGCATCATCTAGGAAAAGCATGGTTGAGGAGTTGGGAAAATTTGCGGAAAAGAATGATACCATCAAAATACTACAAGATGGTAATCTATGTAATACAAATTCCAAGCCCATTATTCAACTCTATGCAATATTGGAGGCTGTGGCTGACAGAATTGAAATACATACCAACGTTGGAGAACAACGCAACAATTGGAATACCCTCTTGTTAAACTCCATCAACATGCTAACGCTCACGGCCTCAACCATGGCTGGTGTTGCAGGCACGGGTAGTTGTGATGGTGCACCACTTTTGGCTCTTAAACTATCATCTGCTCTTCTGTTTTCTGCAGCCACTGGGATGCTACTTGCTACCAACAAAATCCAACCCTCACAACTTGCCGAGGAACAAAGAAATGCAGCAAGACATTTCAAGCAGCTTCAGAGACAGATCCAAACCACAATCGCTGTTGGAAATCCCAGTGAAAGTTATGTTAGGGATGCTGTGGAGAGGGTTTTGGCGTTGGACAAAGCTTATCCACTGCCTTTGTTAGGAGGAGCAATGCTTGAAAAGTTTCCTGAAAAGTTTGAAGCTGCTAGATGGTGGCCACAAAGTAATTTGAACAAGGAGAAATCACAAATGGAGATTAACAATAACAATAATGGATGGAATGTGGAGTTGGAAGAGGAAATGAGGGAGGTCATTGAAGTGGTGAAGAGAAAAGACATGGAGGACTATGAGAGGTTGGGGAACATTGCACTGAAGATAAACAAGGGTTTAGCTATTTCAGCACCTTTGCTCACTGGAATTGCTGCACTGGGGTGTATATTTTCAGGAGATGGATTAGTTCCTGTGGTTGCAGGGGCCTTGGCTACAGTGGTGAATGCTTTTGAGCATGGAGGGCAAGTTGGAATGGTGTTTGAAATGTACAGAAACTGTGGTGGATTTTTCCAGCTGTTGGAAGAGACAATTGAAGCAACAATTGAAGAGAAAGACTTGGAGAAAAGAGAAAATGGGGAGCTGTTTGAATTGAAGATGGCCTTGCAATTGGGAAGAAGTGTATCACAGCTGAGAGAACTTGCCTCAAAATCTGCTTCATGTCGTATAGAACAGAGGGAGATAGATGAATTCGCCAGCAAACTCTTCTAA 1260 0.4246 MSSLHVSVLNKPLHSSSCSSSMKRTNCSINVPKLPRVSLSVPKVLASSRKSMVEELGKFAEKNDTIKILQDGNLCNTNSKPIIQLYAILEAVADRIEIHTNVGEQRNNWNTLLLNSINMLTLTASTMAGVAGTGSCDGAPLLALKLSSALLFSAATGMLLATNKIQPSQLAEEQRNAARHFKQLQRQIQTTIAVGNPSESYVRDAVERVLALDKAYPLPLLGGAMLEKFPEKFEAARWWPQSNLNKEKSQMEINNNNNGWNVELEEEMREVIEVVKRKDMEDYERLGNIALKINKGLAISAPLLTGIAALGCIFSGDGLVPVVAGALATVVNAFEHGGQVGMVFEMYRNCGGFFQLLEETIEATIEEKDLEKRENGELFELKMALQLGRSVSQLRELASKSASCRIEQREIDEFASKLF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01200 419 Coils Coil 261 281 - -
Spst6g01200 419 Pfam Petal formation-expressed 84 395 IPR027949 -
Spst6g01200 419 Coils Coil 354 374 - -
Spst6g01200 419 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 15 419 IPR027949 -
Spst6g01200 419 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01200 Spst-Chr6 10994024 10995283 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01200 - - gmx:100800558 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01200 6 10994024 10995283 Spst6g01200 6 10994024 10995283 ECH