Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00948 ATGGATCAGCCAACTTCGATCGATCAAGACGACGACGCTTTCGTCGACGCGTTTCAACACTGGCCCGACGACGACTCGCCGCAACCTTCCGATTTGGCTTCCACACTGTCGGATCTTCCACCCGAACCGAAGTCACACTGTCCGGCTACCACAATCCGGCGCCGGCGAGTTCGTCGCGATTTTGCGGGAACTCAATCGTTAGGTTCAAACATAGAGAGCTATTTGATCAATGGCAATTCGAGAAGAAGTTTCCGAGACCGCACGAGGCATAGAAATGTCAAGAAAGACGAAAATTCGGAAAAACCCGATTCGGATGAACTGCAACAAGTTAATGCCTCGACGGAGGAGAACAATGAGGGCTCCGCCGTCACATCAGCTGCGAACGACGATGCAGCTGGCGATTCCGTTGACTCGGCGCCGCGACTCAGTGTATCGTCTTCGAGTTTTCAAGACCTTGCCACGGAGTTGGTGATTAACTTATTAGGGTTTCAGATGAAGTTAATGTTCATGTTCATGACTTACCCGTTGCTGTTCATGTTTTATTCATGCATATTTTTCATGGATCCTTTGGGGACAGCAAAGAGAGGTAAGGTTTTCCTTATAGGGATTTTGAACAGAGGATGGTGTTTTGTGTTTCGGTGCATTAGGCCTTATGTTAGTAGATGGTTCAAGGAGAGCGAGTCGGTTTGGAGCGTGGCTTTTCGGTGGGGATGGGGGTTCTTGTGCTCAATCTACGTTTGCTGCGTCTTGTTTGGTCTTCTGGTTTCATCGTTTGTGTTTAGTGGGTTTTTTATGAAGCACATGGTGGAGAAGCCAATTCAGATGAGGGAGGTTTTGAACTTTGATTATACCAAGCATAATCCTGTGGCGTATGTGCCAATAATGTCGTGTGCTGGTGTTATTGGTGGTATGGGTTTTGATGATACGGTTGATGATCGGAAGTGGTTGGGTGAACGCGTTATACCTTCTAAGCACAAGGTGCAAGTCACACTTGAGTTAAGAGTGCCAGAGTCAGGATACAACAGAAACCTTGGTGTCTTTCAGACCAGGGTAGATTTCCTATTGTCTAATGGTAAAGCTATTGCAAGCTCAAGTCAACCTTGCATGTTAAGATTCAGAAGTGAGCCTATCCGCCTAATCACGACTCTCCTCAACATTGCCCCTCTTGTTACTGGCTATATATCCGAAACTCAGACTCTGAATGTGAAGATGAGAGGTTTCGAAGAAGGAGATGTACACACTTCGTGCTTGAAAGTGACCCTAGAGCCACGAGCAGAATATCAACCAGGTGCAGGCATTCCTGAAATATATGATGCATCTCTGATTGTTGAATCCGAACTTCCCTTGTTCAAGAGGATTATTTGGCTTTGGAAGATGAGCATATTTATATGGATCGCGATGATGGCATTCTTCACGGAGTTACTTTTTGCTCTTGTGTGTTGTACGCCTATAATTATTCCGAAAACAAGGCAAAGGGTGGCTTCTGCTCGCGGTCCTGCAACCCTAAACCGTCCTCAGGCACTGGATTAA 1530 0.4647 MDQPTSIDQDDDAFVDAFQHWPDDDSPQPSDLASTLSDLPPEPKSHCPATTIRRRRVRRDFAGTQSLGSNIESYLINGNSRRSFRDRTRHRNVKKDENSEKPDSDELQQVNASTEENNEGSAVTSAANDDAAGDSVDSAPRLSVSSSSFQDLATELVINLLGFQMKLMFMFMTYPLLFMFYSCIFFMDPLGTAKRGKVFLIGILNRGWCFVFRCIRPYVSRWFKESESVWSVAFRWGWGFLCSIYVCCVLFGLLVSSFVFSGFFMKHMVEKPIQMREVLNFDYTKHNPVAYVPIMSCAGVIGGMGFDDTVDDRKWLGERVIPSKHKVQVTLELRVPESGYNRNLGVFQTRVDFLLSNGKAIASSSQPCMLRFRSEPIRLITTLLNIAPLVTGYISETQTLNVKMRGFEEGDVHTSCLKVTLEPRAEYQPGAGIPEIYDASLIVESELPLFKRIIWLWKMSIFIWIAMMAFFTELLFALVCCTPIIIPKTRQRVASARGPATLNRPQALD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00948 509 Pfam Putative adipose-regulatory protein (Seipin) 253 469 IPR009617 GO:0019915
Spst6g00948 509 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 148 506 IPR009617 GO:0019915
Spst6g00948 509 MobiDBLite consensus disorder prediction 105 125 - -
Spst6g00948 509 MobiDBLite consensus disorder prediction 18 50 - -
Spst6g00948 509 MobiDBLite consensus disorder prediction 90 104 - -
Spst6g00948 509 MobiDBLite consensus disorder prediction 85 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00948 Spst-Chr6 8654517 8656914 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00948 K19365 - gmx:100796452 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00948 6 8654517 8656914 Spst6g00948 6 8654517 8656914 ECH