Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00780 ATGGATTCCAATCATTCCATGTCCCCAAGACAGCAAGAGAATCACAAAGCATGGCAGGGGCTGCAATCTCCGAAACCCGTGGCTAGATCCGAACCCTCCAGCCCGTACCCGACAACGTTCGTCCAAGCAGATACGTCGTCGTTCAAGCAAGTAGTTCAAATGCTGACAGGGTCCTCGGAGACAGCGAAACAAGCGTCCTCGAAACCCGCGGCGAACCCGACCCACAGCATCCCGCCCATGAAATCCGTTCCCAACAAGAAGCAACAGTTCAAGCTGTACGAACGGAGAACCAACTCCCTCAAGAACAAACTCAACCTCAACATCAATCCCCTCACCTCGTTTTTCTCGCCTCGTAAACCCGACATCCTCTCCCCCAGCATCCTCGACTTCCCCGCACTTGTCCTCAGCCCCGTCACGCCCCTCATACCCGACCCGTTTGACCGATCCAACGCGCCCCCTTCCCTGGACTCTGAAGCCGAAGATAAAGCCATCAAAGAGAAGGGTTTCTTCTTGCACCCTTCGCCTGCTTCTACTCCCAGAGACGCTGAACCTCGCTTGCTCCCTCTCTTCCCCACCACCTCTCCCAGAGCTTCAGGTCCTTCTTCTTCTTCTACCGCTGCTTCTTGA 627 0.5534 MDSNHSMSPRQQENHKAWQGLQSPKPVARSEPSSPYPTTFVQADTSSFKQVVQMLTGSSETAKQASSKPAANPTHSIPPMKSVPNKKQQFKLYERRTNSLKNKLNLNINPLTSFFSPRKPDILSPSILDFPALVLSPVTPLIPDPFDRSNAPPSLDSEAEDKAIKEKGFFLHPSPASTPRDAEPRLLPLFPTTSPRASGPSSSSTAAS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00780 208 MobiDBLite consensus disorder prediction 154 168 - -
Spst6g00780 208 MobiDBLite consensus disorder prediction 194 208 - -
Spst6g00780 208 Pfam VQ motif 35 61 IPR008889 -
Spst6g00780 208 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 5 198 IPR039611 -
Spst6g00780 208 MobiDBLite consensus disorder prediction 1 87 - -
Spst6g00780 208 MobiDBLite consensus disorder prediction 142 208 - -
Spst6g00780 208 MobiDBLite consensus disorder prediction 1 19 - -
Spst6g00780 208 MobiDBLite consensus disorder prediction 26 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00780 Spst-Chr6 7054155 7054781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00780 - - adu:107468342 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00780 6 7054155 7054781 Spst6g00780 6 7054155 7054781 ECH
Spst3g00602 3 9677587 9678306 Spst6g00780 6 7054155 7054781 PCT