Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00769 ATGATGAAGCCTTTTGGTAAGCTGGGAAAGGATTTGTTAATTAAAAAGCACCCGCTATTGGTTAAAACTAAAAGGCAACAAGTACCATCCAAATCTAAACTAGTTCCCACATCCTCTGGAGCCATTGGATTTCACGAGAGAAAAAGATTGTGTTTCTTCCTTTTGGAGTTTAGAGTCATGGTTTTTCTTGGTCTTGGATCTTCTATTAGTGTGATATCTCATATGGGTCCAACCTTTCTCTCAAATGGTATGATATTGTCAATTGTTTCAGGAACAGGTTCAAAAGAAGTTATCTGTTTGGGAAAGCCTTTCCAAGAGGTTCTTTCTGTGGAAATTCCAGTTCAAACTGGGCAAATCTCCTTTGGCATTTTGGAGTCTTCCATCGACTTCTTAGCCCCTGGATTTCAATGTTTCTGCTTGCTTGAGAAGTTGATGGATGCTCAAATTGCTGATTTGGACTGGGAGACTTCTAGTGACAGCAGTAGCAGTGAGGATCAAGAGGATGTTGATTTTCAATATGGTGGACAAGCTCGGAGCATATTATCAAGTTTAGAGGAAAGCATTGGGAAGATTGATGATTTTCTCTCATTTGAGAGGGCATTTGTCCATGGGGATGTGGTCTATGCCTCCTCAGACCCATCCGGACAGATGGGGAGGATCACAAATGTTGATGTGTTAGTGGACTTAGAAAGTGTTCAAGGAAAGAAATTAAAAAATGTGAACTCCAAGAAACTTATGAAGATTCGCTCAATTTCAGAAGGTGATTATGTAGTTAAGGGGCCATGGATTGGTCAGGTTCAAAGGGTAGTAGACAGAGTGATTATATTGTTTGACGATGGAACTAAATGCGAGGTCATTACCTTGGAAAAAGATAAGCTTTTACCACTGACTCATAATTTTCTTGAAGATTCACAGTATCCCTACTATCCAGGGCAGAGAGTCAAGGTTAAGACCTCCACAGCTTCTAAACCAGCTAGATGGCTGAGTAGAACCTGGAAAGACAATTATGGTGAAGGAACTGTTTGTGCTGTGGAAGCAGGCTTGGTGTATGTTAATTGGCTTGCCTCTGTTCTTTTGGGTTTCAATTTGAATGCGAATGTTCCTCTATGCTGGCAAGATTCAAAAAACTTGACCTTGTTGTCCTGTTTTTCACATACAAACTGGCAACTTGGTGACTGGTGCATGCTCCCAGCTGTGGATCAAAAGGAGCTGATGATTCGAGATGCATCTCCTCATAATGAGCATAGCATGGGCAGAGGATATAAGAGGACAAATCTTAACATTGGGCAATTATTTATAATTGAGAAGATAAAGACCGAAGTTGATATTGTTTGGCAAAATGGTGAACATACTTTGGGATTAGATCCACTCAACTTAATCCCAGTGAATGTCATAAACAGTCATGAATTTTGGCCCCAGCAGTTTGTGCTGGAAAAAGGTGCTTCTGATGATCCTCCCATGCCTAGCAATCAAAGATGGGGTGTAGTTCTTTCTGTTGATGCAAAAGAGCATACTGTAAAGGTGCAATGGAGAACTGCTCCTACATCTGAGACAAATGGTTTGACTGGAGATGCAATGATGGAAACTGTGAGTGCCTACGAACTACTTGAGCATCCAGATTATTCTTGTTGTTTTGGTGATATTGTGTTCAAGGCGGCTCAAAAACAGCTTGGTGACCAAGCTGACAAAGATAATGTGAAGTCGGTGACTGATGTGAATGTAGAGGCTCCTCTGATAGATAATAGTTACCTCTCCTGCATTGGCAATGTTACCGGTTTCATAGATGGTGATGTGGAGGTAAAATGGGCTACTGGTTTAACAACAAAGGTTGCACCTTATGAAATTTTTCGAATTGATAAGCATGAAGGTTCAACTGCAACCCCTGTTCTTTATGAAGCAAATGTTGAGGAGTTCTCTCAAGAGATGACTGAACATAAAAGTCTATCAGACCAGAAGGGAAAGAGCTTGTTAGATTGTAATGGTGATAGAGATAATTGTGAAAAGCATCCAGGAGAGAGTAGTTCCTCATCCATTCCTCAAGCTGCCTTTGAACTTTTCTCCAGCATTAAGGCCAGGATATTCAAAACACTTGGTGTAGCACTTTCCGGAAAATTCTCCCCAATCCCTAGGTTTAAAGAGGGAAATGAATCTAACTTTCTTGATAAGAAAGATTTGGACACTTGTGGCCTTGACACTAAATCACATCTGGTGAGCAAGCCGCAGTCTTCTGAAGGCATGACTCCATATTGTGAAGTTATCAGGACTCATGAGAGGAATGACTTTCCAGTTTCTTTAGACAACAATAGTTCAGATCAGTTGAAGCAGTTTGATGTAATTGATAACTGCTCAGACCACCACTTTTTTTATGAGGGGAAAGGATTGTCATTATCTCTGGGTAAAAAGGTTTGGGTGAAGAAGGTACAACAAGAATGGAGCATCCTGGAAAAAAATCTCCCAGAAACTATTTATGTCCGTGTCTTTGAAGAAAGAATGGATCTCATGCGAGCAGCCATTGTTGGTGTGTCTGGGACACCATATCATGATGGATTGTTTTTCTTTGATATACATTTCCCTCCAGAGTATCCCAGCGAACCCCCGATGGTGCATTACAATTCTGGTGGACTACGATTAAATCCTAATTTGTATGAGACGGGAAAAGTCTGTTTGAGTCTCCTAAATACATGGACCGGTACAGCTGCCGAAGTTTGGAACCCTGGAGTTTCAACAATTCTTCAAGTCCTTCTTTCTCTGCAGGCCCTTGTCCTTAATGAGAAGCCTTATTTCAATGAGGCTGGATATGATCAACAAATTGGTAGAGCTGAAGGGGAGAGAAACTCAGTGAGTTACAATGAGAATGCTTTCCTTGTCACCTGCAAATCCATTCTGTATCTATTAAGAAAGCCTCCCAAGCATTTTGAGGCATTGGTGGAGGAGCATTTCAAACAACGTTCCAAACATATACTTCTGGCTTGTAAGGCATATCTTGAAGGAGCTCCTATTGGATGTGCTTTTGGTGGTGAAAAAACTCAGAATGAAAACTACAAGGGAACTTCTACTGGATTTAAGATGATGTTTGGTAAGCTCTTCCCCAAGCTTGTAGAGGCTTTTTCTGACAAGGGAATTGATTGCAGCCAGTTCGCTGAGATGCAAAAGTAA 3156 0.41 MMKPFGKLGKDLLIKKHPLLVKTKRQQVPSKSKLVPTSSGAIGFHERKRLCFFLLEFRVMVFLGLGSSISVISHMGPTFLSNGMILSIVSGTGSKEVICLGKPFQEVLSVEIPVQTGQISFGILESSIDFLAPGFQCFCLLEKLMDAQIADLDWETSSDSSSSEDQEDVDFQYGGQARSILSSLEESIGKIDDFLSFERAFVHGDVVYASSDPSGQMGRITNVDVLVDLESVQGKKLKNVNSKKLMKIRSISEGDYVVKGPWIGQVQRVVDRVIILFDDGTKCEVITLEKDKLLPLTHNFLEDSQYPYYPGQRVKVKTSTASKPARWLSRTWKDNYGEGTVCAVEAGLVYVNWLASVLLGFNLNANVPLCWQDSKNLTLLSCFSHTNWQLGDWCMLPAVDQKELMIRDASPHNEHSMGRGYKRTNLNIGQLFIIEKIKTEVDIVWQNGEHTLGLDPLNLIPVNVINSHEFWPQQFVLEKGASDDPPMPSNQRWGVVLSVDAKEHTVKVQWRTAPTSETNGLTGDAMMETVSAYELLEHPDYSCCFGDIVFKAAQKQLGDQADKDNVKSVTDVNVEAPLIDNSYLSCIGNVTGFIDGDVEVKWATGLTTKVAPYEIFRIDKHEGSTATPVLYEANVEEFSQEMTEHKSLSDQKGKSLLDCNGDRDNCEKHPGESSSSSIPQAAFELFSSIKARIFKTLGVALSGKFSPIPRFKEGNESNFLDKKDLDTCGLDTKSHLVSKPQSSEGMTPYCEVIRTHERNDFPVSLDNNSSDQLKQFDVIDNCSDHHFFYEGKGLSLSLGKKVWVKKVQQEWSILEKNLPETIYVRVFEERMDLMRAAIVGVSGTPYHDGLFFFDIHFPPEYPSEPPMVHYNSGGLRLNPNLYETGKVCLSLLNTWTGTAAEVWNPGVSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGERNSVSYNENAFLVTCKSILYLLRKPPKHFEALVEEHFKQRSKHILLACKAYLEGAPIGCAFGGEKTQNENYKGTSTGFKMMFGKLFPKLVEAFSDKGIDCSQFAEMQK 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00769 1051 Gene3D Ubiquitin Conjugating Enzyme 764 1043 IPR016135 -
Spst6g00769 1051 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 151 1043 - -
Spst6g00769 1051 SMART ubc_7 805 962 - -
Spst6g00769 1051 Pfam Ubiquitin-conjugating enzyme 807 953 IPR000608 -
Spst6g00769 1051 SUPERFAMILY UBC-like 801 971 IPR016135 -
Spst6g00769 1051 CDD UBCc 804 957 IPR000608 -
Spst6g00769 1051 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 802 962 IPR000608 -
Spst6g00769 1051 FunFam Probable ubiquitin-conjugating enzyme E2 23 764 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00769 Spst-Chr6 6935565 6942405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00769 165 1045 Miscellaneous Gene Families AT2G33770 48.177 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00769 K10581 - gmx:100805463 1549.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00769 6 6935565 6942405 Spst6g00769 6 6935565 6942405 ECH